Plasmodium berghei: PBANKA_1406100
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Entry
PBANKA_1406100 CDS
T01111
Name
(RefSeq) DNA-directed RNA polymerase subunit alpha, putative
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pbe
Plasmodium berghei
Pathway
pbe03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pbe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PBANKA_1406100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbe03021
]
PBANKA_1406100
03400 DNA repair and recombination proteins [BR:
pbe03400
]
PBANKA_1406100
Enzymes [BR:
pbe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PBANKA_1406100
Transcription machinery [BR:
pbe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PBANKA_1406100
DNA repair and recombination proteins [BR:
pbe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PBANKA_1406100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
55152091
NCBI-ProteinID:
XP_034423883
UniProt:
A0A509APW7
LinkDB
All DBs
Position
14:complement(285674..287819)
Genome browser
AA seq
669 aa
AA seq
DB search
MLLLLFFLFITACNYSSYSLISGNKRLSFLPIHSDHSRHNYTRNKNRNFRPYYKNEKRKA
RNFGNRNIYNLVWLDSENKDDRKTEWLNNKNSSNNDSMSNSSDVISDDDIENDITDNENV
SNNFHRFNALYEGDGDTDYDNITSEDSNITDENYDKLLDTEGLNNDDRKIIESENKVTDR
HRYNVYDNEIIKKDSIEIDMDKADKIEREKSGLPPYVYESGNVFEDKPMDYEPEVYDFNT
YNKYFDELCKETKPIIDSYQLDKDLLDDTYFDAKKGGPKTFGFKFKQIQPVKYHQGRSYT
YFFMHSHEVELSPIFLNAFRRVAIKHLKGGRVTALRIPGMKHEYYCIVGVRENFFDLSQN
LRQITFKNVPENADMNNYIIGKFRIKGPMIVVAGHMQLPKNIEIINKNQYICYVAAGSYL
EMDVKIESIEEYVMPEYGSQSRNRDICKDNFIHFCSSCTPVEYFGFTGQRRGINLDILGE
INIVEMHTDGSITPKTALLKTIDYMSENFQYIENALHNNCHSCEDGSVEEEFRNPEFYMD
KERYTDVPWNKYKSTLEEVEETKNWLYRKDVHRQYNIDPESEQSKQEREILWQKKKKMQM
EINKRREQIKKGPTTEEGEIIPDDERHDCLLDWPVDKSERNMNPPRWVIERPLDKTPHIG
HEEIYDEGI
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgctattattgttgttttttctgtttattacggcctgtaattattcgtcttattcctta
atttcgggaaataaaagactatcgtttttgcctatccacagtgatcattcgcgccataat
tatacgagaaataagaataggaattttagaccttattataaaaatgaaaagcgaaaagcg
cgaaattttgggaatagaaatatttataatttagtttggctagacagcgaaaataaggat
gatagaaaaactgaatggttaaataacaaaaatagttctaacaatgatagcatgagtaat
tctagtgatgttataagtgatgatgacattgaaaatgatattactgacaacgaaaatgtg
tcaaacaattttcatcgattcaacgccttatatgaaggggatggagacactgactatgat
aatataactagcgaagattcaaatataactgatgaaaattatgacaaattacttgataca
gaaggattaaataatgatgacagaaaaataatagaatcggaaaataaagtaacagataga
cataggtacaatgtttatgataatgaaataataaaaaaggattcaatagaaatagatatg
gataaagctgataaaatagagagagaaaaaagtggattacccccatatgtatatgaaagt
ggaaatgtatttgaagataagcctatggattatgaaccagaagtatatgattttaataca
tataataaatattttgatgaattatgcaaggaaacaaaaccaataattgattcgtaccaa
ttagataaagatttattagatgatacatattttgatgcaaagaaaggaggtcctaaaaca
tttgggtttaaatttaaacaaattcaaccagtaaaatatcatcaagggagatcatataca
tatttctttatgcattcacacgaagttgaattatctcctatttttttaaatgcatttcga
agagttgcaataaaacatttaaaaggtggtagggttacagctttaagaatacctggtatg
aaacatgaatattattgcatagttggtgttcgagaaaatttttttgatttatcacaaaat
ttaaggcaaataacatttaaaaatgtcccagaaaatgcagatatgaataattatataatt
gggaaatttagaataaaaggcccaatgatagttgtagcaggtcatatgcaattaccaaaa
aatattgagattattaataaaaatcagtatatatgttatgttgccgccggaagttattta
gaaatggatgtcaagatagaaagtatagaagaatatgtaatgccagaatatggatctcaa
tcacgaaatagagatatatgtaaagacaattttattcatttttgtagtagttgtacacct
gtagagtattttggctttactgggcaaagacgaggaattaatttagatattttaggcgaa
attaacattgtcgaaatgcacaccgatggatcaataactccgaaaacagcacttttaaaa
actattgattatatgtcagaaaatttccaatatatagaaaatgctttgcataataattgt
cattcatgtgaagatggatcagtagaagaagaattccgaaatcctgaattttatatggat
aaagaaagatataccgatgtgccatggaataagtacaaaagtactttagaggaagttgaa
gaaaccaaaaattggctatatagaaaagacgtgcataggcaatataacattgatccagag
agcgaacaatcaaaacaagaaagagaaattttatggcaaaagaaaaaaaaaatgcagatg
gaaattaataagagaagagagcaaatcaaaaaaggtcctactacagaagaaggagaaatt
ataccagatgatgaaagacatgattgtttgctagattggccagtagacaaatccgagaga
aatatgaatccgccaagatgggtcatagaaaggccactcgataagacaccccatataggc
cacgaagaaatttatgacgaaggaatttga
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