Plasmodium berghei: PBANKA_1407800
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Entry
PBANKA_1407800 CDS
T01111
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP3, putative
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
pbe
Plasmodium berghei
Pathway
pbe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PBANKA_1407800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pbe03041
]
PBANKA_1407800
Spliceosome [BR:
pbe03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
PBANKA_1407800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
Motif
Other DBs
NCBI-GeneID:
55152109
NCBI-ProteinID:
XP_034423900
UniProt:
A0A509ARZ3
LinkDB
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Position
14:complement(365954..367993)
Genome browser
AA seq
679 aa
AA seq
DB search
MNENQKKRKSRWGEAQKKDDTEKNEKDNQSVNILENFALNSKTPLINSVGNSGNIFAQGL
PNPILNLPILSSAIHLNILKATESAKLAIEKAKRANRLKDDIKNNINKIKYIPKALKFDD
QGREVDDDGNVINIKPIPYSTLKVNINKLNENNILKKKEILNDGDEIIEDSKWFDPRIKN
NNKNDNVMNKKKNALNFIVPGSYIKQQATAKKFYNSKSNINNDIKKMFEEKKKKGQSFEE
LSLNFLRNDININPNLIDINNINNVAKQKEWSESDKYDIDEKWDIVIFKKVENKGNLEEY
ISGQITSWNNKNINDEKENIHNDSENNEASENVFDKKTLYEVNKKLRKCENSKILVLGNS
ELIINNTLYKINLKRITKYIEHPVPLNEEKKEETINTHHMFLTPLERKKLRKRKRQEKER
EKQDKIRIGLIPPPPPKMKLSNLMRVLGNSAVAQPSRIELQVREQMKERELRHFEQNQER
KLKPEEKSKKKINKWKSNPDEENEVLVIYITKVNNKKHIFKININAQQLHLTGVFVMTVL
YNFIIVEGKHISIERYKRLIFRRIKWDEDEMEGGEDEEGGDGMGNGNDDESRNKNKPTYE
FDNNDTNFKNNDDTDFSIINKEREVNCSLIWSGTTKKKNFLNWKILVAKTEMEVTEYLEQ
HDAMHYFHIIKKHHNVLEI
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaaatcaaaagaaaagaaaatcgaggtggggagaagcacaaaagaaagatgat
acagaaaaaaatgaaaaggataatcaatcagttaacattttagagaatttcgctttaaat
tctaaaacaccattaattaatagcgttggaaatagtggtaacatattcgcccaaggatta
ccaaatcctattttaaatttaccaatattatcgtcagcaatccatttaaatatattaaaa
gctactgaatctgcgaaactcgctattgaaaaagcaaaaagagcaaatagacttaaagat
gatataaaaaataatataaataaaataaaatatataccgaaagcattaaaatttgatgat
caaggaagagaagttgatgatgatggtaacgtaataaatataaaaccaataccatattca
actttaaaagtgaatataaataaattaaatgaaaataatattttaaaaaaaaaagaaatt
ttaaatgatggtgatgaaataattgaagattcaaaatggtttgatcctcgaataaaaaat
aataataaaaatgataatgtgatgaacaaaaaaaagaatgctttaaattttatagtcccg
ggttcatatattaaacaacaagcaaccgcaaaaaaattttataacagtaaatcaaatata
aataatgatattaaaaaaatgtttgaagaaaaaaaaaaaaaaggacaatcttttgaagaa
ctatcattaaactttttaagaaatgatataaatataaaccccaacttgatagacataaat
aatattaacaatgttgcaaaacaaaaggaatggtctgaatctgataaatatgatattgat
gaaaaatgggatatcgtaatatttaaaaaggtcgagaataagggtaatttagaagaatat
atcagcgggcaaataactagttggaataataaaaatattaatgacgaaaaagaaaatata
cataatgacagcgaaaataacgaagcaagtgaaaatgtatttgataaaaaaacgctatat
gaagttaataagaagctaagaaaatgtgagaatagcaaaatacttgttttaggaaactct
gaattaataattaataataccttatacaaaataaatttgaaaagaataacaaaatatata
gaacatccagttcctttaaacgaggaaaaaaaagaagaaacaataaatacgcatcatatg
tttttaacgcccctagaaagaaagaaattaagaaaaagaaaaagacaagaaaaagaaaga
gaaaaacaagataaaataagaattgggttaatccccccacctccccctaaaatgaaatta
tcaaatttgatgagggttttaggaaatagtgcagttgcacagccatcaagaattgaacta
caagtgagagaacagatgaaagaaagagaattaagacattttgaacaaaatcaagaaaga
aaattaaaaccagaagaaaaaagcaaaaaaaaaatcaataaatggaaatcgaatccagat
gaagaaaatgaagttttagttatatatataacaaaagtaaataataaaaaacatattttt
aagattaatataaatgctcaacaactgcatttaacaggcgtatttgtaatgactgttctt
tataattttataattgtagaaggaaaacatatatcaatagaaagatataaacgtttaatc
ttcagaagaattaaatgggatgaagacgaaatggagggcggcgaggatgaagagggaggt
gatggtatgggtaatggaaatgacgatgaaagtcgaaataaaaataaaccgacctatgaa
tttgataataatgatacaaatttcaaaaataatgatgatacagattttagcattataaat
aaagaaagggaagttaattgtagtttaatttggagtggtactactaaaaaaaaaaatttt
ttaaattggaaaattcttgtggctaaaactgagatggaagtcacagaatatttagagcaa
cacgatgctatgcattattttcacattattaaaaaacatcacaatgtattggaaatatag
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