Plasmodium berghei: PBANKA_1435300
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Entry
PBANKA_1435300 CDS
T01111
Name
(RefSeq) pre-mRNA-processing factor 17, putative
KO
K12816
pre-mRNA-processing factor 17
Organism
pbe
Plasmodium berghei
Pathway
pbe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PBANKA_1435300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pbe03041
]
PBANKA_1435300
Spliceosome [BR:
pbe03041
]
Complex C
Other components
Step II factors
PBANKA_1435300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
WDR54
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
55152392
NCBI-ProteinID:
XP_034424178
UniProt:
A0A509AQV4
LinkDB
All DBs
Position
14:1325840..1327720
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AA seq
626 aa
AA seq
DB search
MDLLREYDENDDLEVDNSNDKNSNEKGSSNNSDIKTTDPICDENNTSIKNEKNENTQIIN
ISSMNLIDCAPDVNTYDMEIKNYREKFKNIEKKIMFDDPVYHSILSKPQQGPCINGDYNF
LKNTNKNHFNGNIETTFVNKNMFDYQYNHFNVTGIAQNPALKNYYQNNYQNYIIAKNPIS
YSENNGQFHVNKNRKKRGKNESNDYYSMEKYKGPWECRESNNNQEKENRDEQTCDNKKPK
NAKNDDDVDESKKNNSKKTIFLKLEPCGLEEAIQNNTISEQNTLYNDKIVSTLHINYEVD
YYKKSWFELPSEYKEKDFIIEENFPPKKEIHTYKGHKMGVQKIRFFPKYGNYILSGSLDS
TLKLWGSYKSKKCLRTYKGHFKGVKDVLFDKDGSNFISCSYDNNVIYWDTEYGKIKGIYS
QKKTPYCLCLNNDDPNVFLVGGANNKICHIDFRTGNIELEYNEHLQAINTITLCENNKKL
VSTSDDKKIFIWEYGLPVVVKYISDASMFSITSVSVHPSNKFFLCQSMNNIITVYEATGK
FRFFSKKTFKGHKNIGYSINVSCSNDGKYVISGDSNGGLFIWNWKKMSNFKNMKAHSNVC
IDCAWHPFKTSMLATASWDSTIKLWE
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggatttattgagagagtatgacgaaaatgacgatcttgaagtagataattcgaatgat
aaaaactcaaatgagaaaggaagttcaaataatagtgacattaaaacaacggatcctata
tgcgatgaaaacaatacaagtataaaaaatgagaaaaatgaaaatacccaaataataaat
ataagttcaatgaatttaatagattgtgcccctgatgtaaatacctacgatatggaaata
aaaaattatagagaaaaatttaagaatatagaaaaaaaaataatgtttgatgacccagtt
taccatagcattttgagcaaaccccaacaagggccatgtataaatggagactataatttc
ttaaaaaatacaaataaaaaccattttaatggaaatatagaaacaacatttgttaataaa
aatatgtttgattaccaatataatcattttaatgtaactggtattgctcaaaatcccgca
ttaaaaaattactaccaaaataattatcaaaattatataatagcaaaaaatccaattagt
tactctgaaaacaatggacagttccatgtaaataaaaatagaaaaaaaagaggaaaaaat
gaaagtaatgattattactccatggaaaaatataaaggtccatgggaatgtagagaaagt
aacaataaccaagaaaaagaaaacagagacgaacaaacatgtgacaataaaaaacctaaa
aatgctaaaaatgatgacgatgtagatgagtctaaaaaaaataattcaaaaaaaacaatt
tttttaaaattggaaccgtgcgggcttgaagaagcaattcaaaacaatacaataagcgaa
caaaatacattatataatgataaaatagtttcaacattacatataaattatgaagttgat
tattataaaaaatcatggtttgaattaccatcagaatataaagaaaaagattttataata
gaagaaaatttccctcctaaaaaagaaattcatacatataaggggcataaaatgggcgtt
caaaaaattcgctttttcccaaaatatggaaattatattttatctggttccttagatagt
acattaaaattgtggggttcatataaatcaaaaaaatgtttaagaacatacaaaggacat
ttcaaaggagttaaggatgtactatttgataaagacgggtcaaattttataagttgcagt
tatgataataatgttatttactgggacacagaatatggaaaaataaaaggaatatatagt
caaaaaaaaacaccatattgtttgtgcttaaataacgatgatccaaatgtatttttagta
ggtggtgctaataataaaatttgtcatattgattttagaacaggcaatatagaattagaa
tataatgagcatttacaagctataaatacaattactttatgtgaaaataataaaaaactt
gtcagtacatcagatgataaaaaaatatttatttgggaatacgggttgccggttgttgtt
aaatatatttctgatgcttccatgttttcaataacatccgtttctgttcatccaagtaac
aaattttttttatgtcaatcgatgaataatataataactgtttatgaagctacagggaaa
tttagattcttttcgaaaaaaacattcaaaggacataaaaatattggatattctatcaat
gtatcatgtagtaacgatgggaaatatgttatcagtggtgatagtaatggaggtttattt
atatggaattggaaaaaaatgtctaactttaaaaatatgaaggcgcatagtaatgtttgt
atagactgtgcatggcatcctttcaaaacctcaatgttagctacagctagctgggattca
acaattaaattgtgggaataa
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