Plasmodium berghei: PBANKA_1439200
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Entry
PBANKA_1439200 CDS
T01111
Name
(RefSeq) polyadenylate-binding protein 1, putative
KO
K13126
polyadenylate-binding protein
Organism
pbe
Plasmodium berghei
Pathway
pbe03015
mRNA surveillance pathway
pbe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PBANKA_1439200
09123 Folding, sorting and degradation
03018 RNA degradation
PBANKA_1439200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbe03019
]
PBANKA_1439200
03041 Spliceosome [BR:
pbe03041
]
PBANKA_1439200
Messenger RNA biogenesis [BR:
pbe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
PBANKA_1439200
mRNA cycle factors
Stress granule specific factors
PBANKA_1439200
Spliceosome [BR:
pbe03041
]
Complex C
Other components
Complex C specific factors
PBANKA_1439200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_5
RRM_occluded
RRM_3
RRM_7
Motif
Other DBs
NCBI-GeneID:
55152431
NCBI-ProteinID:
XP_034424216
UniProt:
A0A509ASB6
LinkDB
All DBs
Position
14:<1488319..>1490823
Genome browser
AA seq
834 aa
AA seq
DB search
MIANSTNIMPPSFSTASLYVGDLSEDVTEAVLYEIFNTVGHVLSIRVCRDSVTRKSLGYA
YVNYHNLADAERALDTLNYTNIKGQPARLMWSHRDPSLRKSGTGNIFVKNLDKTIDNKAL
FDTFSMFGNILSCKVATDEFGKSKNYGFVHYEDEESAKEAIEKVNGMQLGSKNVYVGHFI
KKSERATNDTKFTNLYVKNFPDTVTEAHLKQLFSPYGEITSMIVKSDNKNRKFCFINYSD
ADSARNAMENLNGKKITEDGKIDYNYDPKKEESEKAANENYNNNNTTSEENATTSETPAE
KKTTDSESATNKDATPGEDQTSANGTTTTVTSTTDAKTEETPNDNTANAGINASITEKKD
KKKSGESTETPNILYVGPHQSRARRHAILKAKFDTLNTESRNKHPGVNLYIKNLDDSMND
QTLKELFEPYGTITSAKVMKDDKDQSKGFGFVCFGTHEEANKAVTEMHLKIINGKPLYVG
LAEKREHRLSRLQQRFRMNPIRHHINNSLSSPIQYPNNQTPQLQFNQNTLNYGRPVITTF
NQNNLISWRHQQAAAQQQAVHQQAAAQQLGFNAGLRGQINQMRLYTQNNMMNHNIGQNKA
SQQLHHNQQYSMGPNPQHQQTNLNAPGQANPQQLQGTAPVPNNQLLNNNMRNMNNRGNRN
LPGMNMQSPKQMPLNMIGAKQTNTQQNQPQGQPQGQPQGQPQAQPQVQSQQKTGQSIQQQ
PIPQNSNFKFTSQARNRMELPNKNANKVNNMNPGYNNNTTLTAAALASAPPSMQKQVLGE
NLFPLVANYHPTLAGKITGMMLEMDNSELLILLENEDQLKKKIDEALVVLQNAK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgatagctaacagtacgaatataatgcccccaagtttttccacagcatcgctttatgtt
ggtgatttaagcgaagatgttacagaagctgttttatatgaaatatttaatacagttgga
catgtattgtctattagagtatgccgagatagtgtaacacgaaaatctttggggtatgca
tatgtgaattatcataatttggcagatgcagaaagagcattagacactttaaattataca
aatataaaaggtcaaccagctcgattaatgtggagtcatagagatccatcattgcgtaaa
agtggaactgggaatatatttgtaaaaaatttagataaaacaatagataataaagcttta
ttcgatacatttagtatgtttggtaatatattatcatgtaaggttgcaacagatgagttt
ggaaaaagtaagaattatggatttgtacattatgaagatgaagaaagtgctaaagaggct
attgaaaaagtaaatggaatgcaattaggatcgaaaaatgtatatgtaggccattttatt
aaaaaatccgagagagctactaatgatacaaaatttacaaatttatatgtaaaaaatttt
cctgatactgtaactgaagcacatttaaaacaattatttagcccatatggtgaaataaca
tctatgatagtaaaatccgataataagaatcgaaagttttgttttattaactattcagat
gcagatagtgcaagaaatgctatggaaaatttaaatggaaaaaaaattacagaggatggt
aaaatagattataattatgatcctaaaaaagaagaaagtgaaaaagcagcaaatgaaaat
tataataataataatactacttctgaggaaaatgctacaacatctgaaacaccagcagaa
aaaaaaacaactgattctgaatcagctactaataaagatgcaacacctggagaagatcaa
acaagtgcaaatggaacaacaacaactgtaacatctacaacagatgcaaaaactgaagaa
acacccaacgataatactgctaatgctggtataaatgcatctattactgaaaaaaaagat
aaaaaaaaatctggagaaagcactgaaacaccaaacatattatatgtaggccctcatcaa
tctagagctagaagacatgcaattctaaaagctaaatttgatacattaaatactgaaagc
agaaataaacatccaggtgtcaatttatatataaaaaatttagatgattctatgaatgat
caaactcttaaagaattatttgaaccatatggaactataacatcagcaaaagttatgaaa
gatgataaggatcaaagtaaaggatttggttttgtttgctttggaactcatgaagaagca
aataaagcagtaacagaaatgcatttaaaaataataaatggaaagccattatatgtggga
ttagctgaaaaaagagaacacagattatccagattacaacaaagatttcgtatgaatcca
ataaggcatcatattaataactcattgagttctccaatccaatatccaaacaatcaaaca
ccacaattacaatttaatcaaaatacattgaattatggaagacctgttattacaacattt
aatcaaaataatttaatatcatggagacatcagcaagcagcagctcaacaacaagctgta
catcaacaagctgctgcacaacaacttggatttaatgcaggtttaagaggccaaataaac
caaatgagattatatacacaaaataatatgatgaatcataatattggccaaaacaaagct
agtcaacaattacatcataatcaacaatattctatggggccaaatccacaacatcaacaa
acaaatttaaatgcaccagggcaagccaatcctcagcaattacaaggcacagcaccagtt
ccaaataaccaattattaaataataatatgagaaatatgaataatcgagggaatcgaaat
ctaccaggtatgaatatgcaatccccaaaacaaatgcctttaaatatgataggagcaaaa
caaactaatactcagcaaaaccaaccacaaggacaaccacaaggacaaccacaaggacaa
ccacaagctcaacctcaagttcaatcacaacaaaaaactggccaatcaatacaacaacaa
ccaattccacaaaatagtaattttaaatttacatcgcaagctagaaatcgtatggaatta
ccaaataaaaatgcaaataaagtaaataatatgaatccaggatataacaataatactaca
ttaactgctgcagcattagcatctgccccaccttcaatgcaaaaacaagtccttggagaa
aatttatttccattagttgccaattaccatccaacattagctgggaaaatcacaggtatg
atgcttgaaatggataattcagaattattaattttattagaaaatgaagatcaacttaaa
aagaaaattgatgaagctcttgtagttttgcaaaatgccaaataa
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