Plasmodium berghei: PBANKA_1461100
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Entry
PBANKA_1461100 CDS
T01111
Name
(RefSeq) pre-mRNA-splicing factor RBM22, putative
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
pbe
Plasmodium berghei
Pathway
pbe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PBANKA_1461100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pbe03041
]
PBANKA_1461100
Spliceosome [BR:
pbe03041
]
Complex B
Other components
Prp19-related factors
PBANKA_1461100
Complex C
PBANKA_1461100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
RRM_3
zf-CCCH
Torus
Nup35_RRM_2
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
55152653
NCBI-ProteinID:
XP_034424438
UniProt:
A0A509ARK0
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All DBs
Position
14:<2315095..>2316252
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AA seq
385 aa
AA seq
DB search
MDRYGHNIRGDVKKQGYENSDLPILCETCLGENPYVRIIREENGKECKICKNAFTLFRWK
PGHNARYKQTIICNKCAKVKNVCQTCLFDLEYNLPVQVRDKFLETSITLPENETNRNFFL
EQLENNISTGTYDKINHGNMDLSKLKRRDPYFKRNMARVCSFWRKNACNRGDECPYLHKE
IHLNKSLASQNIKSRYTGENDVLAETILNRYKNDNIDEKNMANKICIQGISNSTRVENIK
ECFKKFGEIKSFKMIPKDSKIFISYATLTAAKNAAEKYKDGLELNGSNLTVTIQDNPNNN
VWPSPAFGKYNTYLSQFNNNNNNKFTKNNNNFRFHNPPPSHSQGNTMNNMMPPIYFPYNN
YNLNSMPPNAIPYASMLPSEAEQRK
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggatagatatggacacaatataagaggggatgtaaaaaaacaaggttatgaaaattct
gatttaccaatattgtgtgaaacttgtttaggagaaaatccatatgttagaataataagg
gaagaaaatggaaaagaatgtaaaatttgtaaaaatgcatttactttatttcgatggaaa
ccaggtcataatgcaagatataaacaaacaataatatgtaataagtgtgcaaaagtaaaa
aatgtatgtcaaacctgtttatttgatttagaatataatttacctgtacaagtcagggat
aaattccttgaaacaagtattaccttgccagaaaatgaaacaaatcggaattttttttta
gaacagctagaaaacaatatatctacaggtacgtacgataaaattaatcatggaaatatg
gatttatcaaaattaaaaagaagggatccatattttaaaagaaatatggcaagagtatgc
agtttttggagaaaaaatgcatgtaatcgaggagacgaatgcccatatttacataaggaa
attcatttgaataaatcgctagctagccaaaatataaaaagtaggtatacaggtgaaaat
gatgtattagcagaaactatattaaacagatataaaaatgataatattgatgaaaaaaat
atggctaataaaatatgtatacaaggtattagtaattcaacacgggttgaaaatattaaa
gaatgttttaaaaaatttggggaaataaaatcatttaaaatgataccaaaagattcaaaa
atttttatttcatatgctactttaacagctgcaaaaaatgcagctgaaaaatataaagat
ggcctcgaattaaatggatctaatttaacagtaacgatacaagacaatcctaataataat
gtttggccatctccagcctttgggaaatataatacatacctttcccagtttaataacaat
aataataacaaatttacaaaaaataataataattttaggtttcataatcctcctccctca
cattctcaagggaacacaatgaataatatgatgccccctatatattttccttataataat
tataatttgaattcaatgcctccaaatgcaattccatatgcctctatgcttccttctgag
gcagagcaaagaaagtaa
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