Pseudomonas beijingensis: PSH84_08200
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Entry
PSH84_08200 CDS
T10327
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pbej Pseudomonas beijingensis
Pathway
pbej03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbej00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PSH84_08200 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbej03400
]
PSH84_08200 (recC)
Enzymes [BR:
pbej01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PSH84_08200 (recC)
DNA repair and recombination proteins [BR:
pbej03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSH84_08200 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
WLI46842
LinkDB
All DBs
Position
1798668..1802120
Genome browser
AA seq
1150 aa
AA seq
DB search
MPDATSLSPAFMVVHGNRLDELRSLVISLMRRYPLAPLENEIALVQSNGIAQWLKLALAE
DPDEDDSGGCGIAAAIDVQLPGSFMWQLYRTVLGRDEIPAKSLLDKAPLTWRLMRLLPQL
IEQPHFEPLRRFLTHDTDLRKRYQLSERLADLFDQYQVYRADWLEDWAEGRHQTRNVRGE
IMPLAPANCWQAELWRALLLDVGEQGMAQSRAGVHQRYIERINNLDVAPKGLPARVIVFG
ISSLPAQVLEALAGLSRFSQVLLCVHNPCRHHWADIVADKDLLRHQYKRQARKTGMPAVL
DPQTLHQHAHPLLAAWGKQGRDYINLLDSYDDPNSYRAVFRDGRIDLFTDGTPTTLLSQL
QDDILELRPLNETREHWPAVDTERDGSIRFHVAHGAQREVEILHDQLLAHFSADRTLRPR
DIIVMVPDIDSYAPHIRAVFGQLDRSDPRFIPFTLTDQGQRGRDPLLIAVEHLLKLPDSR
FPVSEILDLLDVPALRERFGIDEADLPTLHRWIEGAGIRWGMSAEHRAGLGLPAELEQNS
WRFGLRRMLLGYAVGSSQAYDGIEPYDEIGGLDAALIGPLVALLDALEVAHQELTRPASP
QQWGARLHDLMQLFFQASNEHDDYLLAQLEDLRETWLETCESVGLHDELPLTVVREAWLA
GLDQGRLSQRFLAGAVNFCTLMPMRAIPFKLVCLLGMNDGDYPRAQPPLDFDLMGGDYRP
GDRSRREDDRYLLLEALLSAREKLYISWVGRSIRDNSERPASVLIGQLRDHLANGWRLAD
DSKPLLDALTQEHPLQPFSARYFHQGDELFSYASEWRMLHDTSDHTDKTQVLAPYVQEEP
LGLGQLQDFLRNPVRHFFSQRLKVFFEAIEAPLADDEPFVLDALQRYTLSDSLLEAALIR
LDQPDLALAAHAQRLQNSGLLPMAGFGECMQRELIEPLPDLLQRYQQLLALWPTPLTSAV
PVSLRLQGVSVEGWLSGLHQRSDGAVLAITAIPNSIGSSKTRKWHRLIRPWVNHLVACAN
GLSLTTALVASDDSLLLAPFEEPVAQRLLGDMLLAWQTGMRQPLPIAVKTAFAWLGQTEP
IKAEAAARKAYEGDGQTFEGERRENPALARQFPDFGTLMADETFPDWCDALYRPLLEAPW
RSLVSEEARS
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgccggacgcaacgtccctcagcccagctttcatggtggttcacgggaatcgccttgat
gaactgcgcagcctggtgatcagcttgatgcggcgctacccgctggccccccttgaaaat
gaaatcgcgctggtacaaagcaacggcattgcccaatggctcaagcttgcactggctgaa
gacccggacgaggatgactccggcggctgcggtattgcggcggccattgatgtgcaactg
ccgggcagcttcatgtggcagctttatcgaaccgtcctggggcgtgacgagattccggcc
aagtccctgctggacaaggctccgctaacctggcgtctgatgcgcctgctaccgcagttg
atcgagcagcctcatttcgaacctctgcgacgattccttacccacgacaccgacttgcgc
aagcgctatcagttgtccgagcgcctcgccgatctgttcgaccagtaccaggtgtaccga
gccgactggctcgaggattgggctgaaggtcgacaccagacacgaaatgtccgaggcgaa
atcatgccgctcgcgccggcgaattgctggcaggcggaactgtggcgcgccttgctgctg
gatgtgggggaacaaggcatggcgcaaagccgtgccggcgtacaccagcgctacatcgaa
cgtatcaacaacttggacgtggctccgaaaggtttgccggcgcgggtcatcgtgttcggt
atttcttcgttgcctgcccaagtcctcgaggcgctcgccggtctttcccggttcagccag
gtgctgctatgcgtgcataacccatgtcgccatcattgggcggacatcgtggccgacaag
gacttgctgcgtcaccaatacaagcgccaagcacgcaagaccggcatgcccgcggtcctt
gatccgcaaaccctgcatcaacatgcccatccgttattggccgcttggggtaagcagggg
cgcgactatatcaacctgctcgatagctacgatgaccccaatagctaccgtgcggtattt
cgcgatgggcgaatcgacctgttcacggatgggacccccacgacccttctcagtcaattg
caggacgacatcctcgagctgcgtcccctgaacgaaacccgggaacactggcctgccgtc
gatacggagcgagacggctcgatccgctttcatgtggcccacggtgcccagcgtgaagtg
gaaattctccatgaccagttgctggcccacttcagtgcggatcggaccctgcgcccacgg
gatatcatcgtcatggtcccggacatcgacagttatgcgccgcacattcgcgcggtgttc
ggccagctcgacaggagcgatcctcgtttcataccattcacgctgaccgaccagggccag
cgtggacgtgatccactgctgatcgccgtcgagcacctgctcaagctgccggacagtcgt
ttcccggtcagcgaaatcctcgatctgctggatgtcccggcgttgcgcgaacggtttggc
atcgacgaggccgacctgccgaccctgcaccgttggatcgaaggggcaggcattcgctgg
gggatgagcgccgagcaccgtgccgggttgggcttgcccgcggagcttgagcagaacagc
tggcgtttcggcttgcgtcgcatgttgctggggtacgccgttggcagttcgcaggcctat
gatggcatcgagccctatgacgagatcggtggcctggatgcggcattgatcggtccgctg
gttgcgttgctggatgccctggaggtcgctcatcaggaactcacccggccagcatcgcca
cagcaatggggggcgcgcctgcacgacttgatgcagctgtttttccaggcgagcaacgag
catgacgactatttgctggcccaactcgaagacttgcgtgaaacctggctggaaacctgt
gaatcggtggggctgcacgacgaattgccgctgacggtggtgcgtgaagcgtggctggct
gggctggatcaggggcgactgtcccaacgcttcctggccggagccgtcaacttctgtacc
ttgatgccaatgcgcgcgatccctttcaagctggtgtgcctgctggggatgaatgacggt
gattacccgcgtgcccagccacccttggatttcgatctgatgggcggtgattatcgcccg
ggcgatcgttcccgtcgtgaggatgaccgttacctgttgttggaagcgctgctgtcggcc
cgggaaaagctgtacatcagttgggtggggcgcagcatccgcgacaacagcgagcgaccg
gcatcggtgttgatcggccaattgcgtgatcacctcgccaatggctggcggttggccgat
gacagcaagcctcttctcgatgccctgacccaggagcatccgctgcaaccgttcagtgcg
cgttatttccatcaaggtgacgagctgttcagttacgccagcgaatggcgaatgctccac
gacacctccgatcacaccgacaaaacccaggtgctggcaccttacgtccaggaagaaccc
ttgggccttggtcagttgcaggacttcctgcgcaaccccgtccgccatttcttcagccag
cgcctgaaagtgttcttcgaagccatcgaagcgcctctggccgatgacgaacctttcgtg
ctcgacgcgttgcaacgctacaccctgagtgacagcctgctcgaggccgcgttgatacgc
ctggaccaaccggatctggccctggccgcccacgcccagagacttcagaacagcggcctg
ttaccgatggccgggttcggtgagtgcatgcagcgtgaattgatcgaacccttgccggat
ctgctccagcgctaccaacagcttctggcgttatggcccacaccgctgaccagtgctgtg
cccgtcagcctgcgcttgcagggtgtgagtgtcgaagggtggctcagtggcctgcaccag
cgctctgacggtgcggtcctcgccatcacggccatccccaacagcatcggctcttccaag
acccgcaagtggcatcgtctgatacgaccctgggtcaaccatctcgtggcttgcgctaac
ggcttgtcgttgacgacggcgctggtggccagtgatgacagcttgctgctggcccctttt
gaggagcctgtggcgcaacggttgctgggcgacatgttgctggcctggcagaccggtatg
cgccagccgctgccgatcgcggtgaagacggctttcgcctggctcggtcagaccgagccg
atcaaggccgaagctgcagctcgcaaagcttatgagggcgatgggcagacgttcgaaggc
gagcggcgggaaaacccggccttggctcgacagtttcctgatttcgggaccttgatggct
gacgaaacattccccgattggtgcgatgcgctttaccgaccattgctcgaagcaccatgg
cggtccttggtcagcgaggaggcccgttcatga
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integrated database retrieval system
