Pseudomonas beijingensis: PSH84_12265
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Entry
PSH84_12265 CDS
T10327
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pbej Pseudomonas beijingensis
Pathway
pbej03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbej00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSH84_12265 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbej03019
]
PSH84_12265 (recQ)
03400 DNA repair and recombination proteins [BR:
pbej03400
]
PSH84_12265 (recQ)
Enzymes [BR:
pbej01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PSH84_12265 (recQ)
Messenger RNA biogenesis [BR:
pbej03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PSH84_12265 (recQ)
DNA repair and recombination proteins [BR:
pbej03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PSH84_12265 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
HTH_40
HTH_23
Sigma70_r4_2
GerE
Sigma70_r1_2
HTH_7
Motif
Other DBs
NCBI-ProteinID:
WLI47565
LinkDB
All DBs
Position
2702467..2704593
Genome browser
AA seq
708 aa
AA seq
DB search
MLEQAQRVLKDIFGYDSFRGRQGAIIERVASGGDALVLMPTGGGKSLCFQVPALLRNGLA
VVVSPLIALMDDQVATLEELGVAAASLNSTLSAEQQRDLATRIKRGEVKMLYLAPERLVQ
PRMLAFLQSLEIALFAIDEAHCVSQWGHDFRREYLQLGQLAELFPDVPRIALTATADKRT
REEIVERLHLQDAERFLSSFDRPNIFYRIVPKEQPRKQLLAFLAERRSDAGIVYCLSRKK
VDEVAAFLCEQGFPALPYHAGLPNDLRAYHQKRFLNEEGLIMVATIAFGMGIDKPNVRFV
AHLDLPKSLEAYYQETGRAGRDGLPADAWMAYGLQDVVMLKQMLQNSEGDERHKRLEQHK
LDAMLSLCEETRCRRQTLLAYFDEDMPQPCGHCDNCVDGVETWDATEPARQALSAIFRTG
QRYGVGHLVDVLLGKDNEKVRNFGHQHLSVFGVGKARTESEWRSLFRQLVARGLADIDLE
GYGGLRLSATCRPLLKGEVTLELRRDLKPATAVKSSKSQASQLVRGEERDQWEALRALRR
KLAEEHGVPPYVIFPDSTLLEMLRSQPTSLAEMARVSGVGARKLERYGEAFLQVLGGEAE
APKAVADVRHELITLARAGMTPVQIAGQLQCSEKNVYTMLAEAIGKQQLSLDQALDLPEE
LMGEVQDAFLDGEGELPPVSEVAALFVGRVPEGVLYCVRAALQSEFEV
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaacaggctcaacgcgtcctcaaggacatcttcggctacgacagtttccgtggc
cgccagggtgccattattgagcgtgtggccagcggtggcgatgccttggtgctcatgccc
accggcggcggcaaatccttgtgcttccaggtgccggcgctgctgcgcaacggcctggcg
gtggtggtttcgccgctgatcgcgctgatggacgaccaggtcgcgaccctcgaggaactg
ggggtcgccgccgcttcgctgaactccaccctcagcgccgagcaacaacgggacctggcg
acgcggatcaagcgcggtgaagtcaagatgttgtacctggccccggaacgcctggtacag
ccgcgcatgctggcgttcctgcagagcctggaaatcgccctgttcgccattgacgaagcc
cactgcgtatcgcaatggggccacgatttccggcgtgaatacctgcagctggggcaattg
gcggaactgttccccgacgtgccgcgcatcgccctgaccgctaccgccgacaagcgtacc
cgcgaggaaatcgtcgagcgcctgcacttgcaggatgccgagcggttcctgtcgagcttc
gaccgtcccaatattttctaccgcatcgtgcccaaggagcagccgcgcaagcaattgctg
gcgttcctcgccgagcgccgcagcgatgccggcattgtctattgcctgtcgcgcaaaaag
gtcgatgaagtggcggcgttcctgtgtgagcaagggttcccggcgttgccgtatcacgcc
ggcctgcccaacgacctgcgggcctatcaccagaagcgcttcctcaacgaggaaggcctg
atcatggtggccaccattgcgttcggcatgggcatcgacaagcccaacgtgcgttttgtc
gcacacctggacctgcccaagtccctcgaggcgtactaccaggaaaccgggcgtgccggc
cgtgatggcttgccggccgatgcctggatggcctacggcctgcaagacgtggtgatgctc
aagcagatgctgcagaactccgaaggcgatgagcgccacaagcgcctggagcagcacaag
ctcgacgccatgctctcgctgtgcgaagaaactcgctgccgtcgccagaccttgctggcc
tattttgacgaagacatgccccagccttgcgggcattgcgacaactgcgtcgatggcgtg
gagacctgggacgccaccgaaccggcccgtcaggccttgtcggcgattttccgcaccggc
cagcgctatggcgtcgggcacctggtggacgtattgctgggcaaggacaacgagaaggtc
cgcaacttcggtcaccagcacctctcggtgtttggcgtgggcaaggcgcgcaccgagagt
gagtggcgctcattgttccggcaactggtggcccgcggcctggcggacatcgacctggaa
ggctacggcggcctgcgcctgagtgcgacttgccggccgttgctcaaaggcgaggtcacc
ctcgaactgcgccgcgacctcaagccggcaacggcggtcaagagcagcaagagccaggcc
agccaattggtacgcggcgaagagcgcgaccaatgggaagccttgcgcgccttgcgtcgc
aagctggccgaggaacacggcgtaccgccgtacgtcatcttccccgattcgacgctgctg
gaaatgctccgcagccagcccacctccctggcggaaatggcccgggtcagcggcgtgggg
gcgcgcaagctggagcgttatggcgaagccttcctccaggtcctggggggcgaagccgaa
gcgccgaaagcggtggccgatgtgcgccacgagctcatcacactggcccgggctggcatg
acaccggtgcagatcgctgggcaattgcagtgctcggagaagaacgtctacacgatgctg
gccgaggccatcggcaaacagcagttatccctggatcaggcgctggatctgcccgaggaa
ctgatgggcgaagtacaggacgcgttcctggatggcgaaggcgaattaccgccagtatcc
gaagtcgccgcgctgtttgtcggacgggtgcccgaaggtgtgctgtactgcgtcagggct
gcgttgcagtcggaatttgaagtctga
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integrated database retrieval system
