Pseudomonas beijingensis: PSH84_13280
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Entry
PSH84_13280 CDS
T10327
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pbej Pseudomonas beijingensis
Pathway
pbej03018
RNA degradation
Brite
Enzymes [BR:
pbej01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PSH84_13280
Messenger RNA biogenesis [BR:
pbej03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PSH84_13280
Ribosome biogenesis [BR:
pbej03009
]
Prokaryotic type
rRNA helicases
PSH84_13280
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WLI47744
LinkDB
All DBs
Position
2919101..2920774
Genome browser
AA seq
557 aa
AA seq
DB search
MTQETGGFAAFNLNPNILAAVIATGYEEPSAIQQQSIPIIMAGHDMIGQAQTGTGKTAAF
ALPILHRIDPAKREPQALILAPTRELALQVATAFETYSKQMPGVTVVAVYGGAPMGPQLK
AIRNGAQIVVATPGRLCDHLRRDEKVLATVNHLVLDEADEMLKLGFMDDLEVIFKALPAT
RQTVLFSATLPQSIRAIAERHLRDPQHVKIQTKTQTVTAIEQAHLLVHADQKTSAVLSLL
EVEDFDALIMFVRTKQATLDLASALEAKGYKAAALNGDIAQNQRERVIDSLKDGRLDIVV
ATDVAARGLDVPRITHVFNVDMPYDPESYVHRIGRTGRAGREGRALLLVTPRERRMLQVI
ERVTGQKVAEVRLPDAQAVLDARIKKLTNSLSPLVADAESTHGELLDRLTADIGCTPRAL
AAALLRKATNGQALNLAAIEKERPLVPNNAPRGDRPERTGDRPDRGDRERRAPIPLAEGR
ARCRTALGARDGIAAKNLLGAILNEGGLAREAIGRIQVRDSFSLVELPEDGLEKLLTKLK
DTRVAGKQLKLRRYRED
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgacccaggaaaccggcggcttcgccgcttttaatctcaacccgaacattcttgctgcc
gtcattgcgaccggctacgaagaaccttcggcgattcagcagcaatcgatcccgatcatc
atggccggccacgacatgattggccaggcgcaaaccggtacgggtaaaaccgctgcgttc
gccctgccgatcctgcatcgcatcgatcctgccaagcgcgagccgcaagccctgatcctg
gcgccaacccgtgagttggcgctgcaagtagccaccgcttttgaaacttactccaagcaa
atgcctggcgttaccgttgtggccgtttacggcggcgccccgatgggcccacaactgaaa
gctatccgtaatggcgcgcagatcgttgtcgccacgccgggtcgtctgtgcgaccacctg
cgtcgtgacgaaaaagtcctggctaccgtgaaccacctggttctcgacgaagccgacgag
atgctcaagctgggcttcatggatgacctggaagtcatcttcaaggctctgccagcaacc
cgccagactgtattgttctcggccaccctgccgcaatcgattcgtgccattgccgagcgc
cacctgcgcgatccgcaacacgtaaagatccagaccaagactcagaccgtcaccgcgatt
gaacaggctcacctgctggttcacgccgaccagaagacttccgccgttctcagcttgctg
gaagtggaagacttcgacgccctgatcatgttcgtgcgcaccaagcaagcgaccctggac
ctggccagcgccctggaagccaaaggctacaaagccgctgcgctgaacggtgacattgcc
cagaaccagcgtgagcgcgtgatcgactccctcaaggatggccgcctggacatcgttgtg
gcgaccgacgtcgcggcccgtggcctggacgttccgcgcatcacccacgtgttcaacgtg
gacatgccgtacgacccggaatcctacgttcaccgtatcggccgtactggtcgtgccggt
cgcgaaggccgtgcactgttgctggtcaccccacgtgagcgccgcatgctgcaagtgatc
gagcgtgtgactggccagaaggtggctgaagttcgcctgccggacgcccaggccgttctc
gatgctcgcatcaagaaactgaccaacagcctgtcgcccctggtggctgacgccgaatcg
acccacggtgagttgctcgatcgcctgaccgccgacatcggttgcaccccacgcgccctg
gccgccgcactgctgcgcaaggccaccaatggccaagcgctgaacctggctgcaatcgag
aaggaacgtcccctggtgccgaacaacgcaccgcgtggcgatcgtcccgagcgcaccggt
gatcgtccggaccgtggtgatcgcgagcgtcgtgctccgatcccgttggccgaaggtcgt
gcgcgctgccgtaccgcgctgggtgcccgtgacggcatcgcggccaagaacctgctgggt
gccatcctcaacgaaggcggcctggcccgcgaagcgatcggccgcatccaggtgcgcgac
agcttcagcctggtcgagctgccggaagatggtctggagaagttgctgaccaaactcaaa
gacacccgcgtcgctggcaagcagctcaagctgcgtcgctaccgcgaggattga
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