Pseudomonas beijingensis: PSH84_13960
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Entry
PSH84_13960 CDS
T10327
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pbej Pseudomonas beijingensis
Pathway
pbej00071
Fatty acid degradation
pbej00280
Valine, leucine and isoleucine degradation
pbej00310
Lysine degradation
pbej00362
Benzoate degradation
pbej00380
Tryptophan metabolism
pbej00410
beta-Alanine metabolism
pbej00640
Propanoate metabolism
pbej00650
Butanoate metabolism
pbej00907
Pinene, camphor and geraniol degradation
pbej00930
Caprolactam degradation
pbej01100
Metabolic pathways
pbej01110
Biosynthesis of secondary metabolites
pbej01120
Microbial metabolism in diverse environments
pbej01200
Carbon metabolism
pbej01212
Fatty acid metabolism
Module
pbej_M00087
beta-Oxidation
pbej_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pbej00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
PSH84_13960 (fadB)
00650 Butanoate metabolism
PSH84_13960 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
PSH84_13960 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PSH84_13960 (fadB)
00310 Lysine degradation
PSH84_13960 (fadB)
00380 Tryptophan metabolism
PSH84_13960 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PSH84_13960 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PSH84_13960 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PSH84_13960 (fadB)
00930 Caprolactam degradation
PSH84_13960 (fadB)
Enzymes [BR:
pbej01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
PSH84_13960 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
PSH84_13960 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
PSH84_13960 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
PSH84_13960 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
WLI47870
LinkDB
All DBs
Position
3091746..3093893
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTIKADASIKGVIVSS
GKDVFIVGADITEFVDNFKLPDAELIAGNLEANRIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADYRVMATTAKIGLPEVKLGIYPGFGGTVRLPRLIGADNAIEWIAAGKENRAEDAL
KVGAVDAVVEPGKLQEAALETLKRAISGEFDYKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIGLFLNDQEL
KKKAKAYDEIARDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEDKVK
EDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKIMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDVLYEAKRLGQKNGKGFYAYETDKRGKQ
KKVADSSVLEVLKPIVYEQREVTDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGALYHPTAKLREMAKNGQRFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaactg
aaattcgacctcaagggtgagtccgtcaacaagttcaaccgtctaaccctgaatgaattg
cgtcaggccgtagacactatcaaggcagatgcttcgatcaagggtgtgatcgtcagcagc
ggcaaggacgtgttcatcgtcggtgccgacatcaccgaattcgtcgataacttcaagctg
cccgatgccgaactgatcgctggcaacctcgaagccaaccgtattttcagcgacttcgaa
gacctcaacgtaccgaccgtcgcggccatcaacggcatcgccctgggtggcggcctggaa
atgtgcctggcggcggattaccgcgtcatggccaccacggccaagatcggcctgccggaa
gtcaagctgggcatctacccgggcttcggtggcaccgtgcgcctgccgcgcctgatcggt
gcggacaacgccatcgagtggattgccgctggcaaggaaaaccgtgccgaagacgcgctg
aaagtcggtgccgtggatgccgtggtcgaacctggcaagctccaggaagcggcccttgaa
accctcaagcgcgccatcagcggcgagttcgactacaaggccaagcgccagccgaagctg
gaaaagctcaagctcaacgctattgaacaaatgatggccttcgaaaccgccaagggtttc
gtggcaggtcaagcaggcccgaactacccggcgccggtcgaagcgatcaagaccatccag
aaagccgcgaacttcggtcgcgacaaggccttggaagtcgaggccgctggcttcgtcaaa
ctggcgaagacctcggccgcgcaaagcctgatcggtctgttcctcaacgaccaggaactg
aagaaaaaggccaaggcctacgacgaaatcgcccgtgacgtgaagcaggccgccgtgctc
ggcgccggcatcatgggcggcggcatcgcctaccagtcggcgtccaaaggcacgccgatc
ctgatgaaagacatcaacgagcacgggatcgagcagggcctggccgaagccgccaagctg
ctggtgggtcgtgtcgacaaaggtcgcatgaccgccgcgaagatggccgaagtgctcaat
ggcattcgtccgaccctgtcctatggcgatttcggccatgtcgacctggtggtcgaagcg
gttgtcgagaacccgaaggtcaagcaggcggtactggccgaagtcgaagacaaggtcaaa
gaggacaccatcctcgcctcgaacacctcgaccatctccatttcgctgctggccaaggcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgcca
ctggtggaagtgatccgtggcgagaagtccagtgaactggccgttgccaccaccgtcgcc
tacgccaagaaaatgggcaagaacccgattgtcgtcaacgattgcccgggctttttggtc
aaccgcgtgctgttcccgtacttcggcggtttcgccaagctggtcagcgccggtgtggac
tttgtgcgcatcgacaagatcatggaaaaattcggctggccgatgggcccggcgtacctg
atggacgtggtcggcatcgacaccggccaccacggtcgcgacgtcatggctgaaggcttc
ccggaccgcatgaaggacgaccgtcgttcagctgtcgacgtgctctacgaagccaagcgc
ctgggccagaagaacggcaagggcttctacgcctatgagaccgacaagcgcggcaagcag
aagaaggtcgccgactcgtcggtgctggaagtgctcaagccgatcgtctacgagcagcgc
gaagtcaccgacgaggacatcatcaactggatgatgatcccgctgtgcctcgaaaccgtg
cgttgcctggaagatggcattgtcgaaaccgccgccgaagccgacatgggtctggtctac
ggtatcggtttccctccattccgtggcggtgcgctgcgctacatcgattcgatcggtgtg
gccgagttcgttgccctggctgaccagtacgctgatctgggcgcgctgtaccacccgacc
gcgaagctgcgtgaaatggccaagaacggccagcgtttcttcggttaa
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