Pseudomonas beijingensis: PSH84_15880
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Entry
PSH84_15880 CDS
T10327
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pbej Pseudomonas beijingensis
Pathway
pbej02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pbej00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSH84_15880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbej03021
]
PSH84_15880
Transcription machinery [BR:
pbej03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PSH84_15880
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
HTH_23
Sigma70_r4
HTH_11
PhyR_sigma-like
HTH_20
HTH_IclR
HTH_28
HTH_31
HTH_DeoR
HTH_24
HTH_29
HTH_40
GerE
HTH_7
HVO_A0261_N
DUF6362
MarR_2
HTH_38
HTH_AsnC-type
HTH_10
SpoIIID
HTH_22
Motif
Other DBs
NCBI-ProteinID:
WLI48083
LinkDB
All DBs
Position
complement(3505751..3506266)
Genome browser
AA seq
171 aa
AA seq
DB search
MRSDETLGTADLGLLYRTHHSWLHGWLIRRIGCRDNAADLAQDTFVRLLKSRQSSPLREP
RAYLSSIARGLMIDQYRRRELERAYLESITLLPQHEVPSEESRLMILDALERIDRMLGML
KPRVRQAFLFARLDGLTCAQIAEKLGVSRATVERDLATALQHCYRLRYVEA
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgcgtagcgatgaaacactaggtactgcagatctagggctgctctatcgaacccaccac
tcgtggttacacggctggctaatccgacgcattggatgtcgcgataacgcagcagatttg
gcgcaggacaccttcgtacgtctgctcaaatcccgtcagtccagccccttgcgcgaacca
cgcgcctatttaagcagtatcgcccgcggactgatgattgatcagtatcgtcgtcgcgaa
ctcgaacgtgcctacttggaaagcatcacgttgctgcctcaacatgaggttccctcggaa
gaaagccggctgatgattcttgatgcgctcgagcgcatagaccgcatgctcggtatgctt
aaaccaagagttcgccaggcatttttatttgcccgactcgacggtctaacctgcgcgcaa
atagccgaaaagctgggtgtttcccgcgcgacggtggaacgcgacctggccacggccctg
caacactgctatcgcttgcgttatgtcgaggcgtga
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