Pseudomonas beijingensis: PSH84_16990
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Entry
PSH84_16990 CDS
T10327
Symbol
kdgR
Name
(GenBank) DNA-binding transcriptional regulator KdgR
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
pbej Pseudomonas beijingensis
Brite
KEGG Orthology (KO) [BR:
pbej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pbej03000
]
PSH84_16990 (kdgR)
Transcription factors [BR:
pbej03000
]
Prokaryotic type
Helix-turn-helix
IclR family
PSH84_16990 (kdgR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
HVO_A0261_N
MarR_2
TrmB
HTH_11
HTH_5
HTH_24
HTH_6
DUF5817_CT
FUR
MarR
HTH_22
HTH_23
PadR
HTH_20
HTH_36
Fe_dep_repress
HTH_29
WHD_MCM
Rrf2
HTH_69
HTH_27
HTH_Cmi2_C
HVO_A0114
WHD_MCM8
HTH_7
DUF7343
NirdL-like_HTH
HTH_Crp_2
HTH_45
TetR_N
PF0610-like_N
HTH_34
Dimerisation
RPA_C
Motif
Other DBs
NCBI-ProteinID:
WLI43306
LinkDB
All DBs
Position
complement(3753979..3754764)
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AA seq
261 aa
AA seq
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MDNSVIPNNDLVSAVGRTMAVLEALAEHPEESGVSEIATKLDMSKATVYRFLQSLKARGY
VVQDAEDRYRLSVRLFELGAQALPHLDIVREAEPGMRRINELTGETVHLGILDEGSIVYV
HKIDSKYNLRMYSRIGRRAPLYCTGIGKVLMAWLEEDELLTHLEQESFERRTANTLTSVE
AYLQELEIVRQQGYAEDHEEFEDNMRCLAAPIRDRFGHVIGGMSVSFPCFRFREELKQDY
VKQLMQATQQISSQLGWHARG
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggacaacagcgtcattcccaacaacgatctggtgtcggcggtgggccggaccatggcc
gtgctcgaggcactggccgagcatccggaagaaagcggggtgtcggaaatcgccaccaaa
ctggacatgtccaaggccacggtttatcgcttcctgcagtcgctcaaggcccgtgggtat
gtggtgcaagacgccgaggaccgttatcgcctcagcgtccggctgttcgaactgggcgcc
caggccctgccccacctggacatcgtccgggaagcggagccgggcatgcggcggatcaac
gagctgacgggcgagactgtccacctggggattctcgacgaaggcagcatcgtctacgtg
cacaagatcgactccaaatacaacctgcgcatgtactcgcggatcggccggcgggcgccg
ctgtactgcaccggcatcggcaaggtgctgatggcctggcttgaagaagacgagttactg
acccacctggagcaggagagcttcgagcgccgcacggccaataccctgaccagcgtcgag
gcgtatctgcaggaactggagattgttcgccagcagggttatgccgaggaccatgaagag
ttcgaagacaacatgcgttgcctcgcggcaccgatccgcgaccgtttcggccatgtgatc
ggcgggatgagcgtttcattcccgtgctttcgcttccgggaagagctgaagcaggactac
gtcaagcaactgatgcaagctactcaacagatttcaagccagttgggctggcatgcgcgg
gggtaa
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