Pseudomonas beijingensis: PSH84_17170
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Entry
PSH84_17170 CDS
T10327
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pbej Pseudomonas beijingensis
Brite
KEGG Orthology (KO) [BR:
pbej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbej03400
]
PSH84_17170
DNA repair and recombination proteins [BR:
pbej03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSH84_17170
Archaeal homologous recombinant proteins
PSH84_17170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
AAA_15
nSTAND3
ABC_tran
RsgA_GTPase
MMR_HSR1
cobW
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WLI43341
LinkDB
All DBs
Position
complement(3786711..3790352)
Genome browser
AA seq
1213 aa
AA seq
DB search
MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LNNTGRDAKVPDVDGEIATGDPRTLLRRGTGDGFAEVDFRGIDGRRYRARWEANRAREKA
GGKLQASRQSLRDLDNDQLLASQKGEYKTQLEAALGLNFEQFTRAVLLAQSEFSAFLKAD
DNDRSELLEKLTDTALYTRLGRRAFDKAKQAKDSHRQLQDQATGVTPLAPEARAELDQRF
NDAQQQLKTQQAQLKQLEQQHTWLRDLRQLQDAHTSAAEQLQQAQADWNALADERLKLTR
LEQLAPQRHQFIRQTELSRQLDPLAAQIQQLTQQQIDLHQQQAELETGLGVTQLALAEAR
QQSSDSAPLLRQAFEEQSTLARLVRDASQSAERQEQAQQACSEGQRAIDTLLDQQKQVVE
RLQRIAGELEQSTHLAPLSDAWNAYRDRLQQLMLIGNRLNQGQAELATLEQGAARAAEEL
ANRRQDLEVLYKEAGAEPEAVAEQIQLLGTLLQDNRKQLRAFEDLTRLWASQQELDKRGA
ELEQRQQQALQERDRLVREGGEAKAELTLAEQTLTVTRALLERQRLARSESVEQLRAQLQ
DEQPCPVCGSVEHPYHQPEALLENLGRFDETEEANARKAVEQLNEKVIDLRAQYSGVIAQ
LKELKQQQEQLASQQQGLAPSLEAHPLSAQLLAQDSNKRDAWLTQQNSQLHLRISQDEQR
QAALLTLQQDVARMGQRLREAEATSQQASQHLGNQQQELARDRQRLDEELNHFSTLLPAD
TLQALRSEPAATFLQLDQQIAQRLEQLEQQRDELSEQLQRQQTLEKEQDRQQTRIQQLEA
SRLQFNALSEQQQACQEKLAQLLGEHPSAEHWQHQLDQRLEQTREAEATANQQLQQVRNN
LVQLAAELKARQEQAQTLDHELQALATGIAQWRAGHPELDDAALEALLSLDEQHVGQLRQ
RLLNSEKAIEQARVLLTEREQRLHNHQAQHNGNLAPEQLAEALVELQTQFAASEQRCAEL
RAEQAEDQRRQNANQALARQIEQAYAEYQRWARLDALIGSATGDRFRKLAQAYNLDLLVH
HANAQLRQLVRRYRLKRGGSMLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQV
RRQGNGLSTVEVK
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgaagattctcgccatccgcctgaagaacctggcgtccctggccgggccgtttgaaatt
gatttcaccgccgaacccttggccagtgccggcctgttcgccatcaccggtcccactggc
gccggcaagagcacgctgctcgacgccttgtgcctggcgctgttcggcgccgtgccgcgc
ctcaacaacaccggtcgcgatgccaaggtgccggacgtcgatggtgagattgccacgggc
gatccgcgcacgctgttgcgccgaggcaccggcgatggctttgccgaagtggattttcgc
ggcatcgacgggcgccgctaccgggcccgctgggaagccaatcgcgcccgggaaaaggcc
ggcggcaagttgcaagccagccgccagagcctgcgggacctggacaacgatcaactgctg
gcgagccagaaaggcgaatacaagacccagctcgaagccgccctgggcctgaatttcgag
cagttcacccgcgccgtgttgctggcccagagcgagttcagcgcgttcctcaaggccgat
gacaacgaccgcagcgaactgctggaaaaactcaccgacaccgccctgtatacccgcctc
ggccgccgtgccttcgacaaggccaagcaagccaaggacagccaccggcagttgcaggac
caggccaccggtgtcacgcctttggcccccgaggcccgggccgagctcgaccagcgcttc
aacgacgcccagcaacaactcaagacccaacaggcgcaactcaagcaactggagcagcaa
cacacctggctgcgcgacctgcgccagttgcaggacgcacacaccagcgccgccgaacag
ttgcaacaggcccaggccgattggaacgccctggccgacgaacgcctgaaactgacccgc
ctggaacaactggcgccccaacgccatcagttcatccgccagacggagttgagccggcaa
ctcgaccctttggccgcgcagatccagcagctcacccagcagcaaatcgacctgcaccaa
cagcaagccgaactggaaacaggcctgggcgtcacgcaactggcactggctgaggctcga
caacaaagcagcgacagcgcgccgttattgcgccaagcttttgaagagcaaagcaccctc
gcccgccttgtcagggacgccagccagtccgccgagcgccaggaacaggcgcaacaggcc
tgcagcgaaggccagcgagccatcgacaccttgctcgatcagcaaaaacaggtggtcgag
cgcttgcagcgaatcgccggcgaacttgaacaaagcacgcacctggcaccgctgagcgac
gcctggaacgcctatcgcgaccgcctccaacaactgatgctgatcggcaatcgcctgaac
cagggccaggccgaactcgccacgctggaacaaggtgccgcccgtgccgccgaggaattg
gccaaccgccggcaagacctcgaggtgctgtacaaggaagccggcgccgaacccgaggcc
gtggccgaacaaatccaattgctcggaaccctgctgcaagacaaccgcaagcaactgcgc
gccttcgaagacctgacccggctgtgggccagtcagcaagagctggacaaacggggggcc
gagcttgagcaacgccaacaacaagcgttgcaggagcgtgaccgcctggtgcgtgagggc
ggcgaagccaaggccgaactgaccctcgccgaacagaccctgaccgtgacccgcgcactg
ctggaacgccagcgcctggcccgcagcgaaagcgtcgaacagctgcgcgcacagttgcag
gacgagcagccctgcccggtgtgtggcagcgtcgagcatccttatcatcagcccgaagcc
ctgctggaaaacctcgggcgcttcgatgaaaccgaagaggccaacgcccgcaaagccgtc
gagcagctcaatgaaaaagtcatcgacctgcgggcgcagtacagcggggtcatcgcccag
ctcaaggaactcaaacagcaacaggaacagctcgccagccagcaacaaggcctggcaccc
agcctggaagctcacccgctgtcggcgcaactgctggcccaggactcgaacaagcgtgac
gcctggctgacccaacagaacagccaattgcacctgcgcatcagccaggacgaacaacgg
caagccgccctgctgactttgcagcaggacgtcgcacgcatgggccagcgcctgcgcgaa
gccgaagccaccagccagcaggcctcacagcacctgggcaaccagcagcaagaactggcc
cgcgatcgtcagcgcctggacgaggaattgaaccacttcagcaccctgctgccggccgac
accttgcaggccttgcgcagcgagcccgccgcgaccttcttgcaactggaccagcagatc
gcccagcgcctggagcaattggagcagcagcgcgacgaactgagcgaacaactccagcgc
cagcagaccctggagaaagaacaggaccgccagcagacccgcattcagcaactggaagcg
tcccgcctgcaattcaacgccctgagcgagcaacagcaggcctgccaggagaaactcgcg
caactgctcggcgaacaccccagtgccgaacactggcagcaccaactcgaccagcgcctg
gaacagacccgggaggccgaggcgacggccaaccagcagttgcagcaagtgcgcaacaac
cttgtgcaattggccgccgaactcaaggcccgccaggagcaggcgcaaaccctggaccac
gaacttcaggcgctggccacgggtatcgcgcagtggcgcgccggccaccctgaactggac
gatgccgcccttgaggccctgctcagcctggacgagcaacacgtcggccagttgcgccag
cgcttgctcaacagcgaaaaagccatcgaacaggcccgcgtattgctcaccgaacgcgag
cagcgcctgcacaaccaccaggcccagcacaacggcaacctggcgcccgagcaactggcc
gaagccctcgtcgaactgcaaactcaattcgccgccagcgaacagcgttgcgccgaactg
cgcgccgaacaggccgaggaccagcgccgacagaacgccaatcaggccctggcccggcag
atcgaacaggcctacgccgagtaccagcgctgggcgcgcctcgatgccctgatcggctcg
gccaccggtgaccgcttccgtaagttggcccaggcttacaacctcgacttgctggtgcat
cacgccaatgcccaactgcgacaactggtgcgccggtaccggctcaagcgcggcggcagc
atgctcgggttgctggtgatggacacggaaatgggcgatgaactgcgctcggtgcattcg
ttgtccggcggcgaaacctttctggtctccctcgccctggccttgggcctggcctcgatg
gcctccagcacattgaagatcgaatcgctgttcatcgacgaaggcttcggtagcctcgac
cctgaatcgctgcaactggcgatggacgccctcgacggcttgcaggcccagggtcgcaag
gtcgcggtgatttcccacgtgcaggaaatgcacgagcggatcccggtgcagatccaggtg
cggcgccaaggcaacgggttgagtacggtggaggtgaaatga
DBGET
integrated database retrieval system
