Pseudomonas beijingensis: PSH84_18140
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Entry
PSH84_18140 CDS
T10327
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pbej Pseudomonas beijingensis
Pathway
pbej03030
DNA replication
pbej03430
Mismatch repair
pbej03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbej00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSH84_18140
03430 Mismatch repair
PSH84_18140
03440 Homologous recombination
PSH84_18140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbej03032
]
PSH84_18140
03400 DNA repair and recombination proteins [BR:
pbej03400
]
PSH84_18140
Enzymes [BR:
pbej01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSH84_18140
DNA replication proteins [BR:
pbej03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PSH84_18140
DNA repair and recombination proteins [BR:
pbej03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PSH84_18140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
WLI43510
LinkDB
All DBs
Position
complement(4017324..4018043)
Genome browser
AA seq
239 aa
AA seq
DB search
MSASRNPNRQATPDWPARFAQLAQQARHPLLQRFYQAGVANGQTPLEQVDLLALDLETTG
LDARIDSIVSIGLIPLTLKRIRCGAALYWIIKPARLTHESVTFHRITHADIRHAPRLPDI
MEQLLEAMTGKIMVVHYRAIERDFLDQAFRHHWGEGLQFPVIDTMQLEARQVRGPRNWLD
RLLQRPLASIRLADSRPRYHLPPYHAHQALTDALATAELLQAQVATHYSPDVAIGELWD
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcttcacggaacccgaacaggcaggcaacgccagactggccagcgcgctttgca
cagctggcacagcaagccagacaccctctcttgcaacgtttctaccaggccggcgttgcc
aacggacagacgccgctggagcaggtggacctgctggccttggacctggaaaccaccggg
ttggatgcccgtatcgacagcatcgtcagcattggcctgataccgttgacgctaaagcgg
atacgctgcggcgcagcgctgtactggatcatcaaacccgcgcgactgacccacgaatcg
gtaacgttccatcgcatcacccacgcagatattcgccatgccccccggttgccggacatc
atggaacagctgctggaagcaatgacggggaagatcatggtggtgcactaccgggccatc
gaacgtgatttcctggatcaggcgtttcgtcaccattggggagaaggtctgcaatttcca
gtcattgacaccatgcaactcgaggcgcggcaggtccggggccctcgcaactggctagac
cgactgttgcaacgccctctcgcgtccatccggctggcggacagccgaccgcgctaccac
ctgccgccctaccacgcccatcaggccttgaccgatgccttggccacggccgaactgctg
caagcccaagtcgccacgcactacagccctgacgttgcgattggagaactttgggactga
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