KEGG   Pseudomonas beijingensis: PSH84_20730
Entry
PSH84_20730       CDS       T10327                                 
Name
(GenBank) type VI secretion protein IcmF/TssM N-terminal domain-containing protein
  KO
K11891  type VI secretion system protein ImpL
Organism
pbej  Pseudomonas beijingensis
Pathway
pbej02025  Biofilm formation - Pseudomonas aeruginosa
pbej03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pbej00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PSH84_20730
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    PSH84_20730
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pbej02044]
    PSH84_20730
Secretion system [BR:pbej02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PSH84_20730
SSDB
Motif
Pfam: IcmF-related_N
Other DBs
NCBI-ProteinID: WLI43972
LinkDB
Position
complement(4653259..4657083)
AA seq 1274 aa
MSTLNIVVLVLLAIVVVLSVAALIWWLRTQGGAAIRSFYGAVRHMEQEQGTRDRYQMPWL
MMLGNETDGAQLCTQWRLQPTDKVAWFGRWFCDAEGAVLVVPQALFLPDEGMNRQRGNWW
RLLGLMLRLRSKRPLDAVIWTVPFSTLDDIEHTTELSLKVRRCFIDLLQRFGLSLPVYVV
ITGMEELPGFQELVSALPAEARESMLGWSSPYLPDAAWQSQWSDQALDQVNAALSQSIIE
IGALSGQLGTDLYGLPERFESLRRALQILLEPVFQGNAQGEAPRFRGVYFTASQAPAVSG
DGLTAADSAQRQTVFARQLWSRRLVAERGLAQPVPRLLRLRQRGHRLAAAAALVVGLVWL
GSMVWVWHDSVEEAEGLSRLILGAHKNHLVVDPDEPQLEPTRHNVQNYWNVLEKAPRWRF
VSVVFPTSWFSSVDTQLENGLRLTARHHWILPLRDLLNADLEQLKSIRNTERRGNVESED
PAQWQSYVKAKALVDLAVRLEQHNQMFSQVVNDPKAPLDELVQLSNTALSLGLNTGTLSR
AHFYNRVLFDAQNSDLKGLDLNAARPVIADNFTGLMQRWLDHYFLADNFVRQAGYLKLHL
QQLEAGSGNSLSELEDLMALIDDLQTLVSLTNSAWGRGKGQDLVPGYSQMLDKVSHSALL
GPDIEQDLESQAAKLQQSFRDQWIVQTGSRDNLLVQQGSGLLVLQDHVTALDGAVQALFK
RDFVALALQKAPSDSNPDAMGQGNGGDDFSVALNYFASYKSYASEELPRIPPDYRDALMQ
AAEGAAAQAMWLSLDESEESLPGMGFNVQTAQAVALQKAFMDVHRGDLAIRFQRLLNRRA
LAQIKSGLDEIDAQPLFSQRADIQRWDGSKNFGLQLYGASDPQDLKLSLSQQFGVMLQVA
EQRMPALEWLIVQQDNLSALEHDQVARFMALNDELLKYKNQNPASSAAQLEQLVSRDFIA
MDTTSCAQILQTSSLPSGRGDLAQRTIALQQGALQRCLYLQQNQAATAWNDLANYFNQYL
AGRFPFAQDARASDADPARVQHLLELIDTRLPLAQAGLALSQTPERLAAEDFLNRLKQAG
TWLGPLFVRDKSGILGVEMDVRWRTDRDEERGADQVIAWGLNAGNQQISYPGGSQQNLRW
MVGQPVSLTLRWARNGYQRPANDPLQPNLVVRDLEAGWQYQGPWSLLRLMRSLGAAQRQP
NVDYTDFPLALQLPVTAQTQARTAERTLMFVRLSLMSQGSKLPLSIPPLPTRAPRSPFMA
TASSPAIATREEGL
NT seq 3825 nt   +upstreamnt  +downstreamnt
atgagcaccttgaacatcgtcgtcctggtgttgctcgccatcgtcgtggtgttgtcggtc
gcggccctgatctggtggctacggacccagggcggggcggccatccgcagtttctatggt
gcggtgcgtcacatggagcaggagcagggcacccgcgaccgctatcagatgccctggctg
atgatgctcggcaacgaaaccgacggtgcccaactgtgtacccagtggcgcttgcaaccg
accgacaaggtggcctggttcgggcgttggttttgcgatgccgaaggcgcggtgctggtg
gtgccccaggcgctgttcctgcccgatgaaggcatgaaccggcagcggggcaactggtgg
cgcctgctcgggctgatgttgcgcttgcgcagcaagcggccattggatgcggtgatctgg
accgtgccgttcagtacccttgatgacatcgagcacaccaccgagctgagcctcaaggtc
cggcgctgcttcatcgaccttctgcaacgcttcggcctcagcctgccggtgtatgtggtg
atcaccgggatggaagaactgcccgggttccaggaactggtcagcgcgctgcccgccgag
gcgcgggagtcgatgctgggctggtcgtcgccgtatttgccggacgcggcgtggcagtcg
cagtggagtgaccaggcgctggaccaggtcaacgcggcactgtcgcagtcgatcatcgag
atcggtgcgctgtcgggacaattgggcaccgatctttatggcttgccggagcgtttcgaa
agcttgcggcgggccttgcagatcctgctggaaccggtgttccaaggcaacgcccaaggc
gaagcgccgcgttttcgcggggtgtatttcaccgccagccaggcgccggccgtcagcggc
gacggcttgaccgccgccgacagcgcccagcggcaaaccgtgttcgcccggcagttgtgg
tcgcggcggctggtggccgaacgtggcctggcccagccggtgccacggctgttgcgcttg
cgccagcgcgggcatcgcttggccgcggcggcggcgttggtggtgggcctggtctggctg
gggagcatggtctgggtctggcacgattcggtggaagaagccgagggactgtcgcggttg
atcctcggcgcccataagaaccacctggtggtcgaccctgacgaaccgcaactggagccg
acccggcacaacgtgcagaactactggaacgtgctggaaaaagccccacgctggcgcttc
gtctcggtggtctttcccacctcgtggttctcttccgtggacacgcaactggagaatggc
ttgcgcctgaccgcccggcatcattggatattgccgttgcgggatttgttgaacgccgac
ctggaacagctcaagtccatccgtaacaccgagcggcggggcaacgtcgagagcgaagac
ccggcgcaatggcagagctacgtgaaggccaaggcactggtggacctggcggtgcgcctg
gaacagcataaccagatgttcagccaggtggtgaacgatcccaaggcgccgctggacgaa
ctggtgcaactgagcaataccgcgttgtccctgggcctcaacaccggcaccttgagccgc
gcccatttctacaaccgggtgctgttcgatgcccagaacagcgatttgaaagggctggac
ctgaacgccgcgcgcccggtgatcgccgataacttcaccggcctgatgcagcgctggctg
gaccattactttctggcggacaacttcgtgcgccaggccggttatctcaagctgcacctg
caacagctggaggccggcagcggcaattccttgagcgaactcgaagacctgatggcgctg
atcgacgatttgcagacgctggtcagcctgaccaattcggcctggggccgaggcaagggc
caggatttggtacccggctacagccagatgctggacaaggtcagtcacagcgctttgctg
gggccggatatcgagcaggacctggagagccaggcggcgaagttgcagcagagttttcgc
gaccagtggatcgtccaaaccggttctcgagacaacctgctggtgcaacagggcagtggc
ctgctggtcctgcaggatcatgtcacggcactggacggtgcggtgcaggcgttgttcaag
cgcgacttcgtggcgttggccctgcagaaggccccgtcggacagtaaccccgatgcgatg
ggccagggtaatggcggcgatgatttcagcgtcgcgctgaactacttcgccagctacaag
agctatgccagtgaagaactgccgcgcattccgccggattaccgtgacgcgctgatgcag
gccgccgaaggtgccgccgcacaggccatgtggttgagcctggatgaaagcgaggagtcg
ttgcccggcatgggcttcaacgtgcaaacggcccaggccgtggcgttgcaaaaagccttc
atggatgtgcaccgcggcgacctggcgatccgtttccagcgtctgctcaatcgccgggca
ttggcgcagatcaagagtggcctggacgaaatcgatgcccagccgctgttcagccagcgg
gccgatatccagcgctgggatggttcgaaaaacttcggcttgcagctctacggtgccagc
gatccacaagacttgaagctgagcctgagccagcaattcggcgtgatgctgcaggtcgcc
gagcaacgaatgcctgccctggaatggctgatcgtccagcaggacaacctgtcggccctg
gagcacgatcaggtggcgcgcttcatggccctcaacgatgagttgctcaagtacaagaac
cagaaccctgccagttcggcggcccagttggagcaattggtgagccgggattttatcgcc
atggacaccacctcctgcgcgcagatcttgcagacctccagcctgcccagcgggcgcggt
gacctggcccagcgcacgatcgccttgcagcagggtgccctgcaacgctgcctgtacctg
caacagaaccaggcggcgaccgcctggaatgacctggccaactatttcaatcagtacctg
gccgggcgttttccgtttgcccaggatgcgcgagccagcgatgccgacccggcgcgggtc
cagcacctgctggagctgatcgacacgcgcctgcctctggcccaggccgggttggcgttg
agccaaacgccggagcggttggcggccgaggattttctcaaccgtttgaaacaggccggc
acctggctcgggccgctgttcgtgcgtgacaagagtggcattctgggcgtggagatggac
gtgcgctggcgcaccgatcgtgatgaagagcgcggcgccgaccaggtgatcgcctggggc
ctgaacgccggcaaccagcagatcagctaccccggaggcagccagcagaacctgcgctgg
atggtgggtcagcccgtgagtctgaccttgcgctgggcccgtaacgggtaccagcgtccg
gccaacgaccccttgcaaccgaacctggtggtgcgcgacctggaggccggttggcagtac
caggggccctggtcattactgcgcctgatgcgctcgctgggggcggcccagcgccagccg
aatgtcgactacactgattttcccctggccctgcaactgccggtcactgcccagacccag
gcccgcacggcggagcggacactgatgttcgtgcgcctgtcgttgatgagccagggctcc
aagctgccgttgtcgatcccgccgctgccgacgcgggcaccccgttcacctttcatggcg
accgcatcgagccccgccatcgccacccgtgaggagggcctgtga

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