Pseudomonas beijingensis: PSH84_22980
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Entry
PSH84_22980 CDS
T10327
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pbej Pseudomonas beijingensis
Pathway
pbej02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pbej00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSH84_22980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbej03021
]
PSH84_22980
Transcription machinery [BR:
pbej03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PSH84_22980
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Sigma70_ECF
GerE
HTH_24
PhyR_sigma-like
HTH_11
HTH_20
HTH_40
HTH_36
HTH_29
TetR_N
DUF1804
HTH_38
HTH_28
HTH_Tnp_4
HTH_10
Motif
Other DBs
NCBI-ProteinID:
WLI44383
LinkDB
All DBs
Position
complement(5174074..5174595)
Genome browser
AA seq
173 aa
AA seq
DB search
MPAHDLSLRSAVDVLYSDHHSWLQGWLRKRLGNTFDAADLTQDTFVRVIKARTALDIREP
RPYLSMIAKGLLIDLFRRRSLEQSYLEALAAMPQEQHPSLEEQAILLQALMEIDRLLQGL
GPRVRQAFILSQFDGLTYPQIAERLGVSVRTVNNHMAKAMEHCCLMQIQLQLS
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcccacgatctgtccctacgcagtgctgtcgacgttctgtacagtgatcatcac
agttggctccagggctggttgcgcaagcgcttgggcaacacgttcgatgccgccgacctg
acccaggatacgtttgtgcgggtcatcaaggcgcgcaccgcgctggatatccgtgagccg
agaccgtacttgtcgatgatcgccaaagggctgctgatcgacctgtttcgtcggcgctcg
ctggagcaatcctacctcgaagccttggccgccatgccgcaagagcagcacccatcgctg
gaagagcaggcgatcctgctccaggccctgatggagatcgaccgtctgctccaggggttg
gggccgcgcgtcaggcaagcgttcatcctgtcgcagttcgatggcttgacgtacccgcaa
attgccgagcgcttgggcgtcagcgtccgcacggtcaacaatcacatggccaaggccatg
gaacattgctgcctgatgcagattcaattgcagctttcatga
DBGET
integrated database retrieval system
