Pseudomonas beijingensis: PSH84_24060
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Entry
PSH84_24060 CDS
T10327
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pbej Pseudomonas beijingensis
Pathway
pbej03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbej00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSH84_24060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbej03019
]
PSH84_24060
Enzymes [BR:
pbej01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
PSH84_24060
Messenger RNA biogenesis [BR:
pbej03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PSH84_24060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
WLI44558
LinkDB
All DBs
Position
5428692..5430089
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AA seq
465 aa
AA seq
DB search
MLKKLFQSFRSPLRRTQHIRSTPEVLNSGQHSLQKAQFSRYAVNIVERLQNAGYQAYLVG
GCVRDMLLNITPKDFDVATSATPEQIRAEFRNARIIGRRFKLVHIHFGREIIEVATFRAN
HPQNDEEEDSNQSSRNESGRILRDNVYGTLEEDAQRRDFTINALYYDPVSERILDYANGV
HDIRNRLIRLIGDPKQRYQEDPVRMLRAVRFAAKLDFGIEKHSALPIRELAPMLREIPSA
RLFEEVLKLFLSGNAADTFEMLVDLQLFDPLFPASAEALEHNPTYTHTLISEALINTDLR
IKQNKPVTPAFLFAALLWPALPARVLRLQDRGMPPIPAMQEAAHELIAEQCQRIAIPKRF
TMPIREIWDMQERLPRRSGKRADLLLDNPRFRAGYDFLLLRESAGEQTDGLGEWWTDYQD
ANDSERRDMIRELSGKDDGASGPRKRRRSSGAKRKRAGVPSASGE
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagaagctgttccagtcattccgttctcccttgcgtcgtacgcaacacattcgc
agcacgcctgaagtgctcaacagcggccagcattcgctgcaaaaggcccagttcagccgt
tatgcggtgaacatcgtcgaacgtttgcagaacgccggctaccaggcttacctggtcggc
ggttgcgtgcgcgacatgctgctcaacatcacgcccaaggatttcgacgtcgccaccagc
gccacgccggaacagatacgggccgagtttcgcaatgcacggatcattggccggcgcttc
aagctggtccatatccacttcggccgcgaaatcatcgaagtggcgacctttcgcgccaac
cacccgcaaaacgatgaagaggaagacagcaaccagtcttcccgcaatgagagcgggcgc
atcctgcgcgataacgtctacggcacactggaagaagacgcgcagcgccgcgacttcacc
atcaacgccctgtattacgatccggtcagcgagcgcatcctcgattacgccaacggcgta
cacgacattcgcaatcgcctgatccgtctgatcggtgatccgaagcagcgctaccaggaa
gacccggtgcggatgctgcgggccgtgcgtttcgccgccaagctggatttcggcatcgaa
aaacacagcgccctgccgattcgcgaactggcaccgatgctgcgggaaattccttcggcg
cgcctgttcgaggaagtgctcaagctgttcctgtcaggcaacgcggccgataccttcgaa
atgctggtggacctgcagctgttcgatccgctgttccccgccagcgccgaggccctggag
cacaatccgacctatacccacaccttgatcagcgaagcactgatcaacaccgacctgcgc
atcaagcagaacaagccagtgacgccggcgttcctgttcgccgccttgctctggcctgcc
ctgccggcccgggtgctgcgcctgcaagaccgtggcatgccaccgatcccggcgatgcag
gaagccgcccacgagttgatcgccgaacagtgccagcgcatcgctattccaaaacgcttc
acgatgccgatccgcgagatctgggacatgcaggagcgcctgccacggcgcagcggcaaa
cgtgccgacctgctgctggacaacccgcgtttccgcgcaggctacgacttcctgctgctg
cgtgaaagcgcaggcgagcagaccgatggcctgggcgaatggtggaccgattaccaggac
gccaacgacagcgagcgccgcgacatgattcgtgaactcagcggcaaggatgacggcgcc
agtggcccgcgcaagcgccgccgcagcagcggtgccaagcgcaaacgtgccggcgtaccg
agcgcatcgggcgagtaa
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