KEGG   Pseudomonas beijingensis: PSH84_24660
Entry
PSH84_24660       CDS       T10327                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pbej  Pseudomonas beijingensis
Pathway
pbej03030  DNA replication
pbej03430  Mismatch repair
pbej03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pbej00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PSH84_24660
   03430 Mismatch repair
    PSH84_24660
   03440 Homologous recombination
    PSH84_24660
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pbej03032]
    PSH84_24660
   03400 DNA repair and recombination proteins [BR:pbej03400]
    PSH84_24660
Enzymes [BR:pbej01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PSH84_24660
DNA replication proteins [BR:pbej03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     PSH84_24660
DNA repair and recombination proteins [BR:pbej03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     PSH84_24660
SSDB
Motif
Pfam: RNase_T Rv2179c-like Ribosomal_L26
Other DBs
NCBI-ProteinID: WLI44665
LinkDB
Position
complement(5552554..5553165)
AA seq 203 aa
MERIAVIDFETTGITPSSGCRATEIAVVMLEQGRIVDRYQSLMNAGVRVPAFIEQLTGIS
NAMLRSAPSAEKVMNEVNEFVGITPLLAHNAAFDQKFWDFELGRIKRTRLQNFACSLLLA
RRLMPAAPNHKLGTLNTFAGLPHTGQAHRAMADAEMAANLTAHLASELRQKHGLRELSHD
LLCSLQKVPAAKINEHLKRHRGF
NT seq 612 nt   +upstreamnt  +downstreamnt
ttggaacgcatcgcagtcatcgactttgaaaccaccgggatcaccccgagcagcggttgc
cgggcgactgaaatcgcggtggtgatgctcgagcaaggccggatcgtcgaccgctaccag
agcctgatgaatgccggcgtccgggtgccggccttcatcgagcaactgaccggcatcagc
aacgcgatgctgcgcagcgcaccgtcggcggaaaaggtcatgaacgaggtcaacgagttc
gtcggcatcacgccgctgctggcccacaacgccgcgttcgaccagaagttctgggatttc
gagctgggacgcatcaagcgcacccgcctgcagaattttgcctgctccctgttgctggcc
cggcgcttgatgccggcggcaccgaaccacaagctcggcacgctcaacacgttcgccggc
ttgccccacaccggccaggctcaccgggccatggccgacgccgaaatggccgccaacctc
accgcgcacctggcttcggaactgcggcaaaagcatgggctgcgggagttgtcccatgat
ttgctgtgcagtttgcaaaaagtgccggcggcgaagatcaacgagcatctcaagcggcat
cgcgggttctaa

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