Pseudomonas beijingensis: PSH84_25195
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Entry
PSH84_25195 CDS
T10327
Symbol
ispA
Name
(GenBank) (2E,6E)-farnesyl diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
pbej Pseudomonas beijingensis
Pathway
pbej00900
Terpenoid backbone biosynthesis
pbej01100
Metabolic pathways
pbej01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pbej00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
PSH84_25195 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pbej01006
]
PSH84_25195 (ispA)
Enzymes [BR:
pbej01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
PSH84_25195 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
PSH84_25195 (ispA)
2.5.1.29 geranylgeranyl diphosphate synthase
PSH84_25195 (ispA)
Prenyltransferases [BR:
pbej01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
PSH84_25195 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
WLI44761
LinkDB
All DBs
Position
5675929..5676816
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AA seq
295 aa
AA seq
DB search
MIGAYQASSQARVNAALDTLFSAPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGG
QAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKQFDEACAILAGDGLQSLA
FSALLDPALSDCPAQIRLDMVSALALAAGPAGMVGGQAIDLGSVGLKLDQSALEYMHRHK
TGALIEASVKLGALASGRATPAQLQALQTYARAIGLAFQVQDDILDVESDTQTLGKRQGA
DIARDKPTYPALLGLDAAKAYALELRDQALAALRPFDAAAEPLRDLARYIVERRS
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgatcggcgcctatcaggccagcagccaggcccgggtcaatgctgcactggataccttg
ttcagcgcgccgagcccggaactggcgcgcctgtacgaagccatgcgctacagcgtgatg
aacggcggcaagcgtgtgcggccgctgttggcctacgccgcgtgcgaagccttgggcggc
caggccgaacaggccaacggcgccgcctgtgcggtggagctgatccatgcgtattcgctg
gtgcacgacgacttgccggccatggacgatgatgacctgcgtcgcggccagcccaccacc
cacaagcaattcgacgaagcctgcgcgatcctggctggcgacggcctgcagagcctggcc
ttcagcgccctgctggacccggccctgagcgattgcccggcgcagatccgcctggacatg
gtcagcgccctggcgctggcggccggccccgccggaatggtcggcggccaggccatcgac
ctcggttcggtgggcctgaaactggaccagagcgccctggaatacatgcatcggcacaag
accggcgccttgatcgaggccagcgtcaaactcggcgccctggccagcggccgggccacg
cccgcccagttgcaagccttgcagacctacgcccgggccatcggcctggcgttccaggtg
caggacgacatcctcgacgtcgaaagcgatacccagaccctcggtaaacgccagggcgcc
gatatcgcgcgggacaagccgacctacccggccctgctcgggctcgacgccgcgaaagcc
tacgccctggagttgcgcgatcaggccctggccgcgctgcgaccctttgacgcggcggcc
gaaccgttgcgcgacttggcgcgatatatcgtcgaacgccgcagttga
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