Pseudomonas beijingensis: PSH84_26110
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Entry
PSH84_26110 CDS
T10327
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pbej Pseudomonas beijingensis
Pathway
pbej02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pbej00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSH84_26110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbej03021
]
PSH84_26110
Transcription machinery [BR:
pbej03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PSH84_26110
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Rv2175c_wHTH
Sigma70_ECF
HTH_17
HTH_29
HTH_24
Sigma70_r3
MerR
Motif
Other DBs
NCBI-ProteinID:
WLI44922
LinkDB
All DBs
Position
5867971..5868489
Genome browser
AA seq
172 aa
AA seq
DB search
MSSVPSPHSDLVGALYRDHRAWLLAWLRRNVACAHRAEDLSQDTFVRLLGREELKAPREP
RAFLVAIAKGLLFDYFRRAALEQAYLTELMLIPEAEQPSVEEQQIILEDLKAIDRLLGKL
SSKARAAFLYNRLDGLGHAEIAKRLGVSVPRVRQYLAQGIRQCYIALYGEPT
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgtcagtccccagtcctcatagtgatttggttggtgcgttgtaccgtgaccatcgc
gcttggctattggcatggctgcgacgcaacgtggcgtgcgcgcaccgggccgaggacctg
agccaggacaccttcgtgcgcttgctgggtcgcgaggaactgaaggcgccccgcgaaccc
cgggcgtttctggtggccatcgccaagggcctgctgttcgattatttccgtcgcgcggcc
ttggagcaggcttacctcaccgaactgatgctgatccccgaagccgagcaaccctcggtg
gaagaacagcaaatcatcctggaagacctcaaggccatcgatcgcctgctcggcaaactg
tcgagcaaggcccgcgcagcctttctctataaccgcctcgacggcctcggccacgccgag
atcgccaagcgcctgggggtttcggtgccgcgggtacggcagtacctggcccaaggcatc
cggcagtgctacatcgccctgtacggtgagccgacatga
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