Pseudomonas beijingensis: PSH84_27685
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Entry
PSH84_27685 CDS
T10327
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pbej Pseudomonas beijingensis
Pathway
pbej00300
Lysine biosynthesis
pbej00470
D-Amino acid metabolism
pbej01100
Metabolic pathways
pbej01110
Biosynthesis of secondary metabolites
pbej01120
Microbial metabolism in diverse environments
pbej01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
pbej00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PSH84_27685 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PSH84_27685 (dapF)
Enzymes [BR:
pbej01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PSH84_27685 (dapF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
SPO11_like
Tail_completion_gp17
Motif
Other DBs
NCBI-ProteinID:
WLI45200
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All DBs
Position
6202031..6202861
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AA seq
276 aa
AA seq
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MLLRFTKMHGLGNDFMVLDLVSQHAHILPKHAKQWGDRHTGIGFDQLLIVEAPNNPDVDF
RYRIFNADGSEVEQCGNGARCFARFVLDKRLTAKRQIRVETKSGIIELDVRSDGQIGVNM
GAPRLVPADIPFQAPSQALSYQVDVDGTPVELAAVSMGNPHAVLRVTDINSAPVHELGPK
IEHHPRFPARVNVGFLQVIDRHRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPL
LIDLPGGRLSIEWAGPGQPVMMTGPAVRVYEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcgttttaccaagatgcacggcctgggcaatgacttcatggtcctcgacctg
gtcagccagcacgcgcatatcctgcccaagcatgccaagcaatggggcgaccggcacact
ggtatcggtttcgaccagttgctgatcgtcgaggcgcccaacaacccggatgtggatttc
cgttatcggatcttcaacgccgacggttcggaagtggagcaatgcggcaacggcgcgcgc
tgcttcgcccgcttcgtgctggacaagcgcctgaccgccaagcggcagatccgcgtcgag
accaagagcggcatcattgaactggatgtgcgcagcgacggccagatcggcgtcaacatg
ggcgctccgcgcctggtgccggcggacatccccttccaggcaccgagccaggccctgagc
tatcaggtggacgtcgacggcaccccggtggagctggcggcggtttccatgggaaacccc
cacgccgtgctgcgagtgaccgatatcaacagcgccccggtgcatgagctggggccgaaa
atcgaacaccatccgcgctttccggcgcgggtgaatgtcggtttcctgcaagtcatcgac
cgccaccgcgcacaattgcgcgtctgggaacgcggcgccggggaaacccaggcctgcggt
accggcgcctgtgccgctgccgtcgctgcgatcagccaggggtggatggattcgccattg
ttgatcgacctgcccggcgggcgcctgtccatcgaatgggcaggccctggccaaccggtg
atgatgaccggcccggcagtgcgcgtatacgaaggacaagttcgtctttga
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