Pseudomonas beijingensis: PSH84_27905
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Entry
PSH84_27905 CDS
T10327
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pbej Pseudomonas beijingensis
Pathway
pbej03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pbej00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PSH84_27905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbej03400
]
PSH84_27905
Enzymes [BR:
pbej01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
PSH84_27905
DNA repair and recombination proteins [BR:
pbej03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PSH84_27905
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
CbiK
Motif
Other DBs
NCBI-ProteinID:
WLI45242
LinkDB
All DBs
Position
6249695..6250474
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AA seq
259 aa
AA seq
DB search
MRIISVNVNGIQAAVERGLLSWLQAQNADVICLQDTRASAFELDDAAFQLDGYFLYACDA
EVPAQGGVALYSRLQPKAVINGLGFETADRYGRYLQADFDKVSIATLLLPSGQNGDEDLN
QKFKLMDDFARYLDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSPGFLAPERAWMDE
IIGNMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQLLTPGLRRFVRSARLPRQ
PRFSQHAPLIVDYDWTLTI
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcatcagtgtgaacgtcaatggtattcaggctgcagtcgagcgtggtttgctc
agttggctgcaagcacagaatgccgacgtcatctgcctgcaggacacccgcgcctccgcc
tttgaactggacgatgcagccttccaactggatggttacttcctttatgcctgcgatgcc
gaagtccccgcccagggtggcgtggctttgtactcgcggctgcaaccgaaggctgtcatc
aacggtctcggtttcgagacggcggaccgctacgggcgctacctgcaagccgatttcgac
aaggtcagcatcgcgaccttactgctcccttcggggcagaacggcgatgaagatttgaat
cagaaattcaagttgatggacgacttcgcccgttacctggataaacagcggcgcaaacgt
cgcgagtacatctattgtggctcgctgtacgtggcgcaacagaagctggatatcaagaac
tggcgtgacagccaacaatctcctggtttcctggcgccggaacgggcctggatggacgag
atcattggcaacatgggttatgtcgatgccctgcgtgaagtcagccgcgaaggcgaccaa
tacagctggtggccggacaacgagcaggccgaaatgctcaacctcggttggcgtttcgac
taccagttgctgacgcccgggctgcgccgcttcgtacgcagcgcccgcctgccgcgccag
ccacggttctcacagcatgcgccgctgatcgtggattacgactggacgctgacgatctga
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