Pseudomonas beijingensis: PSH84_28180
Help
Entry
PSH84_28180 CDS
T10327
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
KO
K11893
type VI secretion system protein ImpJ
Organism
pbej Pseudomonas beijingensis
Pathway
pbej02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pbej00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PSH84_28180 (tssK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pbej02044
]
PSH84_28180 (tssK)
Secretion system [BR:
pbej02044
]
Type VI secretion system
Imp/Vas secretion system core components
PSH84_28180 (tssK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
WLI45289
LinkDB
All DBs
Position
complement(6318889..6320220)
Genome browser
AA seq
443 aa
AA seq
DB search
MNHDKVIWQEGMLLRPQHLQHNDRYFDHQLKVRTRLLASYAWGFLALEIDLQFLNMGQLV
VSQANGVLPDGSLFELGGNAEPLALEVPSNTRNTPIYLALPLVTGNHIESRRPEQSDVLA
RYTLYDAQVTDSNAGEAGGSQISCGRPDLRLLLGEQQSDHAFVKLKLCEVLDTTADGVIR
LDPNFVPTFIQARSSHYLLSCLKEIIGMLAHRGDTLAERIRSSGKAGGAQVGDFMMLQLI
NRSELLLRHDLDLEQVHPETLYRTLLALLGDLATFSSDSKRPPLTNRYQHSDQGACFRSL
LQAIRQVLSMVLEQHAIELPLQPRQYGIIVSPVPDLSLLDTASFVLAASAHCDGEELRHR
LPAHLKVGSVERIRQLVNLHLPGIKIRPLPVAPRQIAFHANKTYFILEPNAEDLAQLKRS
AGFAFHVSGDFAELELNFWAIRN
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacgataaggtcatctggcaggaaggcatgctgttgcgcccgcaacatctgcaa
cacaacgatcgctatttcgaccaccagttgaaggttcgtactcggttgctggccagttac
gcctggggattcctggcactggagatcgatctgcaattcctcaacatggggcagctggtg
gtcagccaggccaacggggtcctgccggacggcagcctgttcgaactgggtggcaacgcc
gagccgctggccctggaagtgccgtccaatacccgcaatacgccgatctacctcgcgctg
ccattggtgaccggcaatcacatcgagtcccgtcgtccggagcagtctgatgtgctggcg
cgctataccctctacgacgcgcaggtgaccgactccaacgccggagaggccggcgggagt
cagatcagttgcggccgtccggacctgcgcctgctattaggcgagcagcagagtgatcat
gcgttcgtgaaactcaagctttgcgaggtgctcgataccacggccgatggggtgatcagg
ctcgatccgaactttgtgccgaccttcatccaggctcgctcttcccactacttgctgtcg
tgtctcaaggagatcatcggcatgcttgcccatcgaggcgacaccctggctgagcggatc
cgttccagtggcaaggccggtggtgcgcaagtcggcgatttcatgatgctgcaactgatc
aaccgcagcgaactgttgctgcgtcatgacctggatctggagcaggtgcacccagaaacg
ctgtaccgaacgctgctggcgctgctgggtgacttggcaacgttctccagtgacagcaag
cgcccaccgctcaccaaccgctatcagcacagcgaccaaggcgcgtgttttcgaagcctg
ctgcaagcgatccgccaggtcttgtcgatggtgcttgagcaacacgctatcgagctgcca
ctgcagccgcgccaatacggaatcatcgtctcgccggtgccggatctgtcgctgctggac
accgcttcgttcgtactggcggcaagtgcccactgcgacggcgaagagctgcgtcatcga
ttgccggcgcacctcaaggtcggttcggtggaacgcatccgccagttggtcaacctgcat
ctgcccggcatcaagatcaggcctttgcccgtggccccgcggcagattgcgttccatgcc
aacaaaacctatttcattctcgagcccaacgccgaagacctggcgcaactgaagcgctcc
gcaggttttgcattccatgtcagtggcgatttcgccgagcttgaactgaatttttgggcc
atcaggaactga
DBGET
integrated database retrieval system
