Pseudomonas beijingensis: PSH84_28205
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Entry
PSH84_28205 CDS
T10327
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
pbej Pseudomonas beijingensis
Pathway
pbej02025
Biofilm formation - Pseudomonas aeruginosa
pbej03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pbej00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PSH84_28205 (tssH)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PSH84_28205 (tssH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pbej02044
]
PSH84_28205 (tssH)
Secretion system [BR:
pbej02044
]
Type VI secretion system
Imp/Vas secretion system core components
PSH84_28205 (tssH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
AAA_5
AAA_22
ClpB_D2-small
AAA_16
TniB
nSTAND3
AAA_7
Sigma54_activat
NACHT
AAA_29
AAA_33
SRP54
T2SSE
Clp_N
AAA_24
NBD_SMAX1
Hpr_kinase_C
Motif
Other DBs
NCBI-ProteinID:
WLI45293
LinkDB
All DBs
Position
complement(6323316..6325901)
Genome browser
AA seq
861 aa
AA seq
DB search
MINVDLQQLIQALDAETRRDLERSAEQCVARGADKVLVEDLILGLLERPQGLLALSLQDA
QVSAGELSAALQSRMGHSASRNPVFAPELVQWLQDALLVANLELGRSQVGQAALLLALLR
NPLRYAGSAYLALLNRLSIDRLKAFALSQQAQPVAGLPTPPDGSLLARFTHDLTRQAREG
QLDPVLCRDGEIRQMIDILVRRRKNNPIVVGEAGVGKTAIVEGLALRIVAGDVPPALEGV
ELLSLDMGLLQAGASIKGEFERRLKGVIDEVKASPTSIILFIDEAHTLIGAGNNAGGADA
ANLLKPALARGELRTIAATTWTEYKKYFEKDPALARRFQPVQLHEPTVSEAVTILRGLAR
VYENSHGIYLRDDAVVAAAQLSARYLAGRQLPDKAVDVLDTACARVRISLAAAPQSLERL
RGEWAEGERQRRALRRDAEAGLSIDLQALEALEVRLAAIEDERQTLEIQWTEQRILAERL
LSLRQQLAGARESAVDQALSIEALAAAVDETHGTLVAAQTHEHLVSFEVCPRLVAEVINA
WTGVPLAQLAREHNLKIASFATDLRARIRGQEPAVQALDRALRAGAAGLNKPDAPMGVFL
LVGPSGVGKTETAHALADLLYGGERFITTINMAEFQEKHTVSRLIGAPPGYVGFGEGGML
TEAVRQKPYSVVLLDEVEKADPDVLNLFYQIFDKGLANDGEGREIDFRNTLILMTSNLGS
ERIDELCENGAQPSAERLEESIRPILIDHFKSALLARMCVVPYYPVSGPVLRELVEIKLK
RLGERLHRRQLGFSYCEHLVSHLVERCSRNDRGARLIDQLLDRHVTPLVADRLLAAMAGG
EPLRHVHAVLNGDASVSCEFS
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacgtagaccttcagcaactgatccaggcgttggacgccgaaaccaggcgcgat
ctggagcgctctgccgagcaatgcgtggcccgtggcgcagacaaggtcctggtggaagac
ttgatactgggcttgttggaacgtccccaaggtctgctggcgctttccttgcaggatgcc
caggtcagtgcgggcgagctgagcgcggccctgcaatcacggatggggcacagcgcttcg
cgcaacccggtattcgccccggaactggtgcagtggttacaggatgcgctgctggtggcc
aatctcgaactcggccgtagccaagtcggacaagccgcgttgctcctggcgttgctgcgc
aacccccttcgctacgccgggagtgcttatctggcgctgcttaaccggctgagcattgat
cggctgaaagcgttcgccttgtcgcaacaggctcaaccggttgccggcctgcccaccccg
ccggacggctccctgctggcgcgctttacccatgacctgacccgacaggcccgcgaaggc
caactcgacccggtgctttgtcgcgacggcgaaatcaggcagatgatcgatatcctcgtt
cggcgtcgcaaaaacaatccaatcgtggtcggtgaagcgggggtgggcaagaccgccatc
gttgaagggttggcgttgcgtatcgtcgccggggacgtacccccggcgcttgagggcgtt
gaactgctttcgctggatatggggctgctgcaggccggtgccagcatcaaaggtgaattc
gagcgtcgtctcaagggggtgatcgacgaggtcaaggcttcgccaacatccatcatcctg
ttcattgacgaggcccataccttgatcggcgcaggcaacaacgccgggggcgccgatgcg
gcgaacctgctcaagccggccttggcccggggcgagctgcgaacgatcgcggccaccacc
tggaccgagtacaaaaaatattttgaaaaagacccagccctggcccgtcgtttccaaccg
gtgcaattgcacgagccgaccgtcagcgaggcggtgaccatcctgcgtggcctggcccgg
gtctacgaaaacagtcatggcatttacctgcgcgatgacgcggtggtcgcggcagcgcaa
ttgtcggctcgctatctggccggtcgtcagttgccggacaaggccgtcgatgtgctcgat
accgcctgcgctcgcgtgcgcatcagcctggccgctgccccgcaaagtctggagcgattg
cgcggcgaatgggccgaaggcgagcgccaacgccgggcgctgcggcgcgatgcagaggcg
ggcctatcaattgatcttcaagcgttggaggcgctggaggtgcgtctggcggccattgaa
gacgagcgccaaacgttggaaatccaatggaccgagcaacgtatcctcgcggaacgtttg
ctgtcgctgcggcagcaattggccggggcacgggaaagcgcagtggaccaagccctcagt
atcgaagccctggcggcggcggtggatgaaacacacggcacgctggtggccgcgcaaacc
catgaacacctggtcagctttgaagtttgcccgcgactggtcgccgaagtgatcaacgcc
tggaccggtgtaccgctggcgcaactggcgcgcgagcacaacttgaaaatcgccagtttt
gccacagacctgcgtgctcgcattcgcggccaggaaccggccgtgcaggcgcttgatcgc
gcgttacgcgctggcgccgcaggcctgaacaaacccgatgctccgatgggcgtatttctg
ttggtgggccccagtggtgtcggcaagaccgaaacggcacatgccctggccgacctgctt
tatggcggtgagcggttcatcaccacgatcaacatggccgagttccaggagaaacatacc
gtttcccgactgatcggagcgccgccgggttacgtcggttttggcgaaggcggcatgctc
accgaagccgtgcggcaaaagccctatagcgtggtgttgctcgatgaggtcgaaaaagcc
gacccggatgtgttgaacctgttctaccagatcttcgacaaaggccttgccaatgatggg
gaagggcgggagatcgattttcgcaacaccctgattctgatgacatcgaacctgggcagt
gagcgtattgacgagctgtgcgaaaacggcgcacaaccgagtgccgaacgccttgaggaa
tccattcgcccgatccttatcgaccatttcaagtcagcgctgctggcccgcatgtgtgtg
gtgccgtattacccggtcagcgggcccgtgctgcgtgaactggtggaaatcaaactcaag
cgcctgggcgagcggctgcaccgtcgtcaattgggcttcagttactgcgagcatttggtg
agccacctggtcgagcgctgcagtcgcaatgaccgtggcgcgcggctgattgaccaactg
ctcgaccggcatgtcacgccgctggttgccgaccggttgctcgcggccatggccggtggc
gaaccgctgcggcatgtacacgcggtgctcaacggcgatgccagcgtgtcgtgtgagttc
tcctga
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