Pseudomonas beijingensis: PSH84_28225
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Entry
PSH84_28225 CDS
T10327
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
KO
K11900
type VI secretion system protein ImpC
Organism
pbej Pseudomonas beijingensis
Pathway
pbej02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pbej00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PSH84_28225 (tssC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pbej02044
]
PSH84_28225 (tssC)
Secretion system [BR:
pbej02044
]
Type VI secretion system
Imp/Vas secretion system core components
PSH84_28225 (tssC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
PBC
Motif
Other DBs
NCBI-ProteinID:
WLI45297
LinkDB
All DBs
Position
complement(6329092..6330567)
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AA seq
491 aa
AA seq
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MNTHAVQQQSQDNADYSILESIIAQTRLTPDDEAYDIARRGVSAFIEELLKPQNSGEPVK
KAMVDRMIAEIDAKLSRQMDEILHHPQFQALESAWRGLQLLVDRTDFRENIKIEMLNVSK
DDLLDDFEDSPEVMQSGLYKHIYTAEYGQFGGQPVGAVIANYFMSPSSPDVKLMQYVSSV
ACMSHAPFIAAAGPKFFGLESFCGLPDLKDLKDHFEGPQFAKWQSFRQSEDARYFGLTVP
RFLLRTPYDPQENPVKSFVYKETVANSHEHYLWGNTAYAFGTRLTDSFAKFRWCPNIVGP
QSGGAVEDLPLHHFESMGEIETKIPTEVLVSDRREYELAEEGFISLTMRKGSDNAAFFSA
SSVQKSKFFGNSAEDKHAELNYKLGTQLPYMMIVNRLAHYLKVLQREQLGSWKERTDLER
ELNNWIRQYVADQENPSAEVRGRRPLRAAKIIVSDVEGEPGWYRVSLNVRPHFKYMGADF
TLSLVGKLDKA
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaatacccatgcagtacagcagcagagccaggacaacgcggactacagcattcttgaa
agcatcatcgcccagacccgcctgaccccggacgatgaagcctacgacattgccaggcgc
ggtgtgtctgcgttcatcgaagagctgctcaagccgcaaaacagcggcgagccggtcaag
aaagccatggttgaccgcatgatcgccgaaattgatgccaagctcagccgccagatggac
gaaatcctccatcacccgcaattccaggcgttggagtcggcgtggcgcggcttgcagttg
ctggtggaccgcactgacttccgcgaaaacatcaagatagaaatgctcaacgtgtccaag
gacgatttgctggacgacttcgaggactcgccggaagtcatgcagtcgggcctgtacaag
cacatctacacggctgagtacggccagttcggtgggcagccggtgggcgcggtcatcgcc
aactatttcatgtccccaagctcgccggacgtgaaattgatgcagtacgtgtccagtgtc
gcctgcatgtcccatgcgccattcatcgccgcagccggtccgaaattcttcggcttggag
agcttctgcggactgccggacctcaaggacctgaaagaccatttcgaaggcccgcaattc
gccaagtggcagagcttccgtcaatcggaagacgcccgctatttcggcctgaccgtaccg
cgcttcctgttgcgcaccccctacgatccccaagagaacccagtcaaatcgttcgtctac
aaggaaaccgttgccaacagccacgagcactacctgtggggcaacacggcgtacgcgttc
ggcacgaggctgaccgacagcttcgccaaattccgctggtgcccgaacatcgtcggtccc
caaagcggtggggcggtcgaagacctgccgttgcaccacttcgaaagcatgggcgaaatc
gaaaccaagatcccgaccgaagtcctggtgtccgatcgtcgcgaatacgaactggccgag
gagggcttcatctccctgaccatgcgcaaaggcagtgacaacgccgccttcttctccgcc
agctccgtgcagaaatcgaagtttttcggtaacagcgccgaggacaagcatgcagagctg
aactacaagctcggcacacagttgccttacatgatgatcgtcaatcgcctggctcactac
ttaaaggtgctgcagcgcgagcaactgggctcctggaaagagcgtacggacctggagcgt
gagctcaacaactggattcgccaatacgtggctgaccaggagaacccgagtgccgaagtc
cgtggccgtcgtccgctacgtgccgcgaagatcatcgtcagcgacgtggaaggtgaaccg
ggctggtaccgcgttagcctcaacgttcggcctcatttcaagtacatgggcgccgatttc
acgttgtcgttggttggcaagctggacaaggcgtaa
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