KEGG   Pseudomonas beijingensis: PSH84_28540
Entry
PSH84_28540       CDS       T10327                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
pbej  Pseudomonas beijingensis
Pathway
pbej00010  Glycolysis / Gluconeogenesis
pbej00020  Citrate cycle (TCA cycle)
pbej00260  Glycine, serine and threonine metabolism
pbej00280  Valine, leucine and isoleucine degradation
pbej00310  Lysine degradation
pbej00380  Tryptophan metabolism
pbej00620  Pyruvate metabolism
pbej00630  Glyoxylate and dicarboxylate metabolism
pbej00640  Propanoate metabolism
pbej00670  One carbon pool by folate
pbej00785  Lipoic acid metabolism
pbej01100  Metabolic pathways
pbej01110  Biosynthesis of secondary metabolites
pbej01120  Microbial metabolism in diverse environments
pbej01200  Carbon metabolism
pbej01210  2-Oxocarboxylic acid metabolism
pbej01240  Biosynthesis of cofactors
Module
pbej_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pbej_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pbej_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
pbej_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
pbej_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pbej00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    PSH84_28540 (lpdA)
   00020 Citrate cycle (TCA cycle)
    PSH84_28540 (lpdA)
   00620 Pyruvate metabolism
    PSH84_28540 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    PSH84_28540 (lpdA)
   00640 Propanoate metabolism
    PSH84_28540 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    PSH84_28540 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    PSH84_28540 (lpdA)
   00310 Lysine degradation
    PSH84_28540 (lpdA)
   00380 Tryptophan metabolism
    PSH84_28540 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    PSH84_28540 (lpdA)
   00670 One carbon pool by folate
    PSH84_28540 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pbej04147]
    PSH84_28540 (lpdA)
Enzymes [BR:pbej01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     PSH84_28540 (lpdA)
Exosome [BR:pbej04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   PSH84_28540 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox HI0933_like FAD_oxidored Pyr_redox_3 AlaDh_PNT_C Lys_Orn_oxgnase GIDA FAD_binding_2 NAD_binding_8 Thi4 FAD_binding_3 aRib 3HCDH_N
Other DBs
NCBI-ProteinID: WLI45356
LinkDB
Position
6406374..6407774
AA seq 466 aa
MSNYDVVILGGGPGGYNAAIRAGQLGLKAACVEGRATLGGTCLNVGCMPSKALLHASELY
EAATGAEFANLGIEVSPTLNLAQMMKQKDESVTGLTKGIEFLFRKNKVDWIKGWGHIDGP
GKVTVTADDGSKTELNAKDIVIATGSEPMPLPGVTIDNQRILDSTGALALGEVPRHLVVI
GAGVIGLELGSVWRRLGAQVTVVEYLDRICPGVDGEAGKTLQRALAKQGIQFKLSSKVTG
ATTSVSGVQLQIEPAAGGEAQTLDVDYVLVAIGRRPYTQGLGLENVGLSTDKRGMLANQR
HRTEAPGVWVIGDVTSGPMLAHKAEDEAMACIEQIAGKAAEVNYALIPSVIYTRPELASV
GKTEEQLKAEGRAYKVGKFPFTANSRAKINHETEGFAKVLADERTDEILGVHLVGPSVSE
MIGEYCVAMEFSASAEDIALTCHPHPTRSEALRQAAMNVEGMATQM
NT seq 1401 nt   +upstreamnt  +downstreamnt
atgagcaactacgacgtggtcattctgggcggcgggcccggcgggtataacgcggcgatt
agggccggtcagttagggttgaaggccgcctgtgtcgagggccgggccaccctgggcggc
acctgcctgaacgtcggttgcatgccttccaaggcattgctgcacgcctcggaactgtac
gaagcagccacgggagcggagttcgccaacctgggcattgaagtcagtcccaccctcaat
cttgcgcaaatgatgaagcagaaagacgaaagcgtgacgggcctgaccaagggcatcgag
tttctgtttcgcaagaacaaggtcgactggatcaaaggctggggccacatcgacgggcca
ggcaaagtaaccgtcaccgcggacgatggcagcaagaccgaactgaacgccaaggacatc
gtcatcgccaccggctcggaacccatgccgctgccaggcgtgaccatcgataaccagcgc
atcctcgactccaccggtgccttggccttgggtgaagtgcctcggcatctggtggtgatc
ggcgcaggcgtgatcggcttggaactgggttcggtctggcggcgcctgggcgcccaggtg
acggtggtggaatacctcgatcgcatctgcccgggcgtggacggcgaggccggcaagacc
ttgcaaagggccttggctaaacaaggcattcaattcaagttgagttcgaaggtcaccggc
gccacgacctcggtcagcggcgtgcaattgcagatcgaaccggcggcgggcggagaggca
cagaccctggatgtcgattacgtgctggtcgccatcggccgtcggccctacacgcaaggg
ctggggctggaaaacgtcgggttgagcaccgataaacgcggcatgctcgccaaccagcgt
caccgcaccgaagcccccggcgtctgggtgatcggcgacgtgacgtccggaccgatgctg
gcccacaaggccgaagacgaagccatggcctgcatcgaacagatcgccggcaaggccgcc
gaggtcaactatgcactgatccccagcgtcatctacacccgtccggaactggccagcgtc
ggcaagaccgaggaacaactcaaggccgaaggccgcgcctacaaggtcggcaagtttccg
ttcacggccaacagccgggccaagatcaaccacgagaccgaagggttcgccaaggtcctg
gccgatgaacgcaccgatgaaatccttggcgtgcacctggtgggccccagcgtcagtgag
atgatcggtgagtactgcgtggccatggagttcagcgcctcggccgaggacatcgccctg
acctgccacccgcaccctacccgctcggaagcgttgcgccaggcggccatgaatgtggag
gggatggcgacgcagatgtag

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