Podospora bellae-mahoneyi: QC761_0104260
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Entry
QC761_0104260 CDS
T09795
Symbol
RSE1
Name
(RefSeq) pre-mRNA-splicing factor rse1
KO
K12830
splicing factor 3B subunit 3
Organism
pbel
Podospora bellae-mahoneyi
Pathway
pbel03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
QC761_0104260 (RSE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbel03021
]
QC761_0104260 (RSE1)
03041 Spliceosome [BR:
pbel03041
]
QC761_0104260 (RSE1)
03036 Chromosome and associated proteins [BR:
pbel03036
]
QC761_0104260 (RSE1)
Transcription machinery [BR:
pbel03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
QC761_0104260 (RSE1)
Spliceosome [BR:
pbel03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
QC761_0104260 (RSE1)
Complex B
QC761_0104260 (RSE1)
Complex C
U2 SnRNP specific factors
QC761_0104260 (RSE1)
Chromosome and associated proteins [BR:
pbel03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
QC761_0104260 (RSE1)
TFTC complex
QC761_0104260 (RSE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
CPSF_A
Beta-prop_RSE1_2nd
Beta-prop_BBS7
UBM
Motif
Other DBs
NCBI-GeneID:
87892543
NCBI-ProteinID:
XP_062728026
LinkDB
All DBs
Position
7:914059..918733
Genome browser
AA seq
1210 aa
AA seq
DB search
MATTSNMFLYSLTIQPPTTISQALLGQFSGTKEQQIITASGSRLTLLQPDPRQGKVNTIL
SQDVFGIIRAIASFRLAGSHKDYIILATDSGRIAIIEYLPKTNRFNRIHLETFGKSGVRR
VVPGQYLAADPKGRACLIASLEKNKLVYVLNRNAQAELTISSPLEAHKPGVLVLSLVALD
VGYANPVFAALELDYTEADQDPTGQAGQEPEAQLVYYELDLGLNHVVRKWSDAVDPTSSL
LFQVPGGSDGPSGVLVCGEENVTYRHSNQEAFRVPIPRRRGPTEDPQRKRTIVSGVMHKL
KGSAGAFFFLLQTEDGDLFKVTLDMVEDDNGNPTGEVKRLKIKYFDTIPIATSLCILKSG
FLFVASEFGNHSLYQFEKLGDDDEELEFSSEEFPTDSRAAYNPVYFQPRPLENLTLVESI
DSMNPQIDCKVANLTGEDAPQIYSVCGNGARSSFRMLKHGLEVSEIVASELPGTPAAVWT
TKLTKYDEYDAYIVLSFTNATLVLSIGETVEEVSDSGFLTTVPTLAVQQLGEEGLIQVHP
KGIRHIVQGRVNEWPAPQHRSIVAAATNENQVVIALSSGEIVYFEMDADGSLAEYDEKKE
MSGTVTSLSLGRVPEGLRRSSFLAVGCDDCTVRILSLDPESTLEMKSIQALTAAPASLSI
MSMEDSFGGTTLYLHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKPTKLFQVSVQGRPC
VLALNSRPWLGYTDPITKGFVMTPLSYVDLEYGWNFSSEQCLEGMVGIHANFLRIFTIEK
LGDNMIQKSIPLTYTPKRLVKHPEQPYFYTIEADNNTLPPELRAQLLAQSNTNGDAAILP
PEEFGYPKARNRWASCISIVDPVSDEPSVLNRVDLDNNEAAVSAAVVSFASQDGESFLIV
GTGKDMILSPRQFSEGYIHVYRFHDDGRDLEFIHKTKIEEPPMALIPFQGRLLAGIGKTL
RIYDLGLKQLLRKAQAEIAPQLIVSLQTQGNRIVVGDVQQGITYAVYKPESNKLLAWADD
TINRWTTCTAMVDYESVAGGDKFGNVWILRAPERASQESDEPGSEIQLVHAKSYLHGAPN
RTALMAHFYTQDLPTSITKTNLVVGGQDVLLWSGIQGTVGVLIPFVSREDVDFFQSLESH
MRAEDPPLAGRDHLIYRGYYVPVKGVIDGDLCERFALLANDKKQMIAGELDRSVREIERK
ISDIRTRSAF
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccacctctaacatgttcctgtactcgttgacgatccagccgccaaccacgata
tcgcaagcgttgctgggccagttctcgggaaccaaagaacaacaaatcatcaccgcctct
ggctctcgcctcacattactccaaccagacccacggcagggcaaggtcaacactattcta
tcacaggatgtctttggaattattagggccattgcgtccttccgccttgctggcagccac
aaggactacatcatcctcgcgacagactcgggccgtatcgctatcatcgagtacctgccc
aagaccaacaggtttaatcgcatccacctagagacctttggaaagtcgggtgttcgacgt
gttgtacctggccaataccttgccgccgatcccaaaggaagagcctgtttgattgcctcg
ctcgagaagaacaagcttgtctacgtccttaatcgcaacgcccaagcagagctcaccatc
tcctcgccattggaagcacacaagcccggtgtcttggtgctttcgctcgtcgccctcgat
gttggatacgccaaccctgtgtttgcagccctggagctcgactacaccgaagcagaccag
gacccgactgggcaggctggtcaggagccagaagcacagcttgtatactacgaactcgat
ctcggtctgaaccatgtggttcgcaagtggtctgacgcggtggacccaacctcgtcgtta
cttttccaggttcccggcggcagcgatggtcctagtggtgttctggtctgcggcgaggaa
aatgttacttatcggcactcgaatcaggaggctttccgcgtaccaattccacgacggcgg
ggtcctaccgaggatccccagagaaagcgaaccattgtctcgggcgtcatgcacaagctc
aagggcagcgcaggtgcctttttctttttgctgcagacagaagatggggatctcttcaag
gtcacgctggatatggtcgaggacgacaatgggaaccccaccggagaggtgaaacggctc
aagatcaaatactttgatacgattccaatagccacaagcttgtgcattctcaagagcggt
ttcctctttgtggcaagcgagtttggcaaccattctctgtaccaattcgaaaagctcggc
gatgatgacgaggaactcgagttctcgagcgaggagttcccaacagactctcgtgccgcg
tacaatccggtatacttccagcctcggccactcgaaaatctgactctagtcgagagcatc
gactcgatgaaccctcaaatagattgcaaagtggcaaacttgacaggagaggacgcgccg
caaatctactcggtgtgtggtaacggtgcgagaagctctttccgtatgcttaagcatggg
ctggaggtatcagaaattgttgcctcggaactccctggcacacctgctgcagtctggacg
accaagctcacaaagtacgacgaatacgatgcttacattgttctttcgttcaccaacgcg
acattggtattgagcattggcgaaaccgtcgaggaagttagtgacagcggattcctcacc
actgtgccaacattggctgtccaacagctgggcgaggaaggccttattcaggttcacccc
aagggcattagacatattgtccaaggtcgtgttaatgaatggccagcgcctcagcatcgg
tcgattgtggctgccgctaccaatgagaatcaagtcgtcattgctctgagctcgggcgag
attgtgtactttgagatggatgcagatggatctctcgccgagtacgacgagaagaaggaa
atgtctggtaccgtcacgtctttgagtttgggaagggtaccggaaggcttacggcggagt
tcgttcttggctgttgggtgtgacgactgcactgtgcgcattctcagcctcgacccggaa
tccaccctcgaaatgaagtcgatccaggctcttacagcggcgccggcatcgctttccatc
atgtctatggaagactcgttcggtggtaccaccctatatctgcatatcggcttacactct
ggtgtctacctccgaactgtgttggacgaggtcactggtgagcttacggacacccgtcaa
aaattcttgggccccaagcccaccaagctcttccaggtttctgtgcaggggcggccatgt
gtgctcgccctgaactcccgcccatggttgggctacacggaccctattaccaagggtttc
gtaatgacaccgctgagctatgtagatcttgaatatggatggaactttagcagcgagcag
tgtctggaaggcatggtgggtatccacgccaatttcctcagaatcttcaccatcgagaag
ctcggggacaacatgatccaaaagtccattcctctgacctatacaccaaagcgcctggtc
aaacaccccgagcagccctacttctacaccatcgaagccgacaacaacactctcccaccg
gagctccgggcgcagctgctggctcagtctaatactaatggtgacgcagccattctgccg
ccagaggagtttggctatccgaaggccaggaacaggtgggcatcgtgtatcagcattgtc
gaccctgtcagcgatgagccaagcgttctcaaccgtgtcgacctcgacaacaacgaagcc
gccgtcagtgctgccgttgtgtcgtttgccagccaagacggcgagagcttccttatcgtt
ggtaccggcaaggacatgattctcagccctcgccagttcagcgaaggctacatccatgtc
taccgcttccacgacgatggccgtgacttggaattcatccacaagaccaagattgaagaa
ccccccatggcgctcatccccttccaaggccgtctcctcgcaggcattggcaagacgttg
agaatctatgatcttggtctcaagcagcttctccgcaaggcccaagccgagattgcccct
cagcttattgtgtcgttgcagacgcaaggtaaccgtatcgtcgtcggtgatgtccagcag
gggattacctacgccgtctacaaacccgaaagcaacaagctccttgcgtgggcggatgac
accatcaaccgatggacgacctgcacagccatggtcgactacgaatccgtcgccggcgga
gacaaattcggcaacgtctggattttgcgggctcccgagcgcgcctcccaggagtcggac
gagcccggctcggaaatccaactcgtccacgcaaagagctacctccacggcgcacccaat
cggaccgctctcatggcgcacttttacactcaggatcttcctacgtcgatcaccaagacg
aatcttgttgtgggcgggcaggatgttttgctctggagcgggattcaggggacggtgggg
gtgctgatcccgtttgtgagcagggaggatgtggatttcttccagagcttggagagtcac
atgagggccgaggatccgccgcttgccgggagggatcatttgatttatcgggggtattat
gtgcccgtcaagggggtgattgatggggatctgtgcgagaggtttgcgctgttggcgaat
gacaagaagcagatgattgctggggagctggacaggagcgtgagggagattgagaggaag
atttcggacatccgtacgaggtctgcattctag
DBGET
integrated database retrieval system