Podospora bellae-mahoneyi: QC761_209730
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Entry
QC761_209730 CDS
T09795
Symbol
NAM7
Name
(RefSeq) ATP-dependent RNA helicase
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
pbel
Podospora bellae-mahoneyi
Pathway
pbel03013
Nucleocytoplasmic transport
pbel03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pbel00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
QC761_209730 (NAM7)
03015 mRNA surveillance pathway
QC761_209730 (NAM7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbel03019
]
QC761_209730 (NAM7)
Enzymes [BR:
pbel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
QC761_209730 (NAM7)
5.6.2.5 RNA 5'-3' helicase
QC761_209730 (NAM7)
Messenger RNA biogenesis [BR:
pbel03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
QC761_209730 (NAM7)
mRNA cycle factors
Common to processing body (P body) and stress granule
QC761_209730 (NAM7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF1_Zn_bind
AAA_12
AAA_11
UPF1_1B_dom
AAA_30
AAA_19
ResIII
DEAD
NPHP3_N
UvrD-helicase
Helicase_RecD
Viral_helicase1
PIF1
SLFN-g3_helicase
AAA_22
nSTAND3
ATPase
SRP54
AAA
AAA_16
Ribosomal_S13_N
AAA_5
Motif
Other DBs
NCBI-GeneID:
87896193
NCBI-ProteinID:
XP_062735332
LinkDB
All DBs
Position
2:3584929..3588917
Genome browser
AA seq
1090 aa
AA seq
DB search
MEDAFNHLGNHLVSDSAATINATADDFDDETESFLGDLKEHGSPTNALRRHDDNDNQGPE
DFRDDDSNFSGPRNDVNSRGPEEEKELPAHACAYCGIHSPSCVVKCIAKECNKWFCSARG
NSSSSHIVNHLVRARHKEVQLHPESALGDTTLECYNCGNKNVFMLGFIPAKSDTVVVLLC
RQPCAAGSSAKDMSWDVSRWQPLIEDRSFLNWIVSPPTDAEQLRARHLTPPMIAKLEEMW
KEAPSATVADLEKGTGVDDDPHPVLLKYDDPYHYQNVFGPLVKMESDYDKKLKEAQSEDH
LVVRWDMGLNNKHLASFILPKIESGDVKLAVGDEMRIKYKGELRAPWEGVGYVIKIPNNQ
SDEVTLELRKAANDKSVPTECTHNFSADYVWKATSYDRMQFAMKTFAVDELSVSGYIFHK
LLGHEVAVAPMKTQMPKRFHVPGLPELNHSQITAIKTVLSTPLSLIQGPPGTGKTVTSAT
IIYHLARMNNSQVLVCAPSNVAVDQLCERIHRTGLKVVRLTAKSREDVESSVSFLALHEQ
VRLYKQSSELTNLNKLKAAAGELSSQDEKRFKQLTRQAEREILNSADVVCCTCVGAGDPR
LSKMKFRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMNKKAAKAGLNQSL
FERLVKLNLVPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVTITERLRKDVDFPWPVAET
PMMFWSNLGNEEISASGTSYLNRTEASNVEKIVTRFFKAGVKPSDIGVITPYEGQRSYIV
STMQNTGTFKKESYKEVEVASVDAFQGREKDFIVLSCVRSNDNQGIGFLSDPRRLNVALT
RAKYGLVIIGNPKVLSKHELWHHLLVHFKDRKCLVEGPLTNLQTSLIQFSRPKMSFRPRH
NAQAQHVSGGYTNGRGYGGGVNGSHRDFDTGSVLSYANGIPDDVSSIHSSALGGAGLTSA
YPQMFSNFHPEQWPGLPGANPASRPGAKGRARIAESVAGESVANSEFTDASASVIGGKGV
GQGGASLGAGLSEAISSARPTSYSRSDRLKQYVESGGRSLGLGSGYGRRFDDDEKSVSTA
FASQIGTGFD
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgccttcaaccacctcggaaaccaccttgtttccgactctgccgccaccatt
aatgccaccgccgacgacttcgacgatgaaaccgaaagcttcctgggcgatcttaaggaa
cacggctccccgacaaacgccctccgtcgccatgatgacaatgacaaccagggccccgaa
gacttccgcgatgatgacagcaacttcagtggcccaagaaacgatgtaaactcgagaggt
ccagaagaggaaaaggagctgcccgctcacgcttgcgcgtattgcggcattcactccccg
tcctgtgtggtcaagtgcattgcaaaggaatgcaacaagtggttctgcagtgctcgtggt
aattcaagttcctcacatattgtcaaccaccttgtacgagcccgtcacaaagaggttcag
cttcatcccgagtcagcccttggcgataccaccctcgaatgctacaactgcggcaacaag
aatgtctttatgctgggcttcatccccgccaaatccgataccgttgtcgttcttttgtgt
cgccaaccttgcgctgctggcagttcggccaaggacatgagctgggatgtttcgcgatgg
caacccctcatcgaggatcggtcctttctcaactggattgtctccccaccgaccgacgcc
gaacagcttcgagctcgccatttgaccccgcccatgattgcgaaacttgaggagatgtgg
aaagaggctccgagtgccactgtcgccgatctggagaaaggaaccggcgtagacgacgat
ccgcatcccgtgctcctcaagtacgatgatccgtaccactatcagaatgtctttgggccc
cttgtgaagatggagtcggactatgacaagaagctcaaggaagcgcagtctgaggaccac
ctcgtggttcgctgggatatgggtctgaacaacaagcacctggccagctttatcctgccc
aagatcgaatccggcgatgtcaaattggccgtgggcgatgagatgcgcatcaagtacaag
ggcgaacttcgtgccccatgggagggtgttggatatgttatcaagatccccaacaaccag
tcggacgaagttacccttgagttaagaaaggcggcgaacgacaaatcggttcccaccgaa
tgcacgcacaacttctcggccgactatgtgtggaaggccacgtcctacgaccgtatgcaa
ttcgctatgaagaccttcgctgtggatgagctcagtgtttctgggtacattttccataag
ttgctgggccacgaggtagccgttgcccccatgaagacgcagatgccgaagaggttccac
gttccagggttgcctgagctgaatcacagtcagatcactgccatcaagactgttctgtcc
acccctctcagtttgatccaggggccgccaggtaccggaaagacggtcacctcagccacc
attatctaccatcttgccagaatgaacaatagtcaggttctcgtctgcgccccctccaac
gttgctgtggaccagctttgcgaacgtattcaccgcacgggtctcaaggtcgttcgcttg
acagccaagtctcgtgaggatgtcgaatcgtccgtcagcttcttggccctccacgagcag
gtccgcctttacaagcagagcagtgagctcacaaatctcaacaagctcaaggccgccgca
ggtgaactgtcttctcaggacgagaagaggttcaagcaactgactcgccaggccgagagg
gagattctcaacagcgctgatgtcgtgtgctgcacttgcgtcggtgctggcgacccgaga
ctgtccaaaatgaagttccgaaacgtgctgatcgacgagtctactcagtcagctgagccc
gagtgcatgattcctcttgtcctcggatgcaagcaggttgttcttgttggtgatcacaag
cagctcggccccgtcatcatgaacaagaaggcggccaaggctggtcttaaccagtctctg
ttcgagaggttggtcaagctcaacctggttcccattcggctcaacgttcagtatcgtatg
cacccttgcctttcagaatttccttccaacatgttttacgaagggtcgctccagaacggt
gtcaccataactgagcggcttcgcaaggatgtcgacttcccctggcctgttgctgaaact
ccgatgatgttctggtccaacttgggcaacgaagaaatttcggcatccggaacatcttac
ctgaaccgcaccgaagcttccaacgtggagaagattgttactcgcttcttcaaggctggt
gtgaagccgtctgatatcggtgtcattactccgtacgaaggccagcgcagctacattgtc
agcaccatgcagaatacgggcactttcaaaaaggagagctacaaggaggtcgaggttgct
tcggtcgacgctttccagggccgtgagaaggactttatcgttctttcttgcgtccgttcc
aacgacaaccagggcattggtttcttgtccgatcctcgtcgtctcaacgtcgcgctcact
cgagccaagtatggtcttgtcatcattggcaaccccaaggttctgtccaagcatgagtta
tggcatcatcttcttgttcacttcaaggatcgcaagtgcttggtggaaggccctcttacc
aaccttcagacttccctcatccagttcagccggcccaagatgagcttccgtccccgccac
aacgcacaggcccagcatgtgtccggtggttataccaacggcagaggttatggcggcggt
gtcaacggctcacaccgcgatttcgacactggctcggtactttcgtatgccaacggtatt
ccggatgatgtctcgtccattcacagctctgccttgggtggcgcgggccttacatcggct
taccctcagatgttctccaatttccatccagagcagtggcccggcttgcccggggccaac
ccggctagccgtcccggggccaagggtcgtgctcgcattgctgagagtgttgctggcgag
agcgttgccaacagcgagtttacggatgcgagtgcgagtgttattggtggcaagggcgtc
ggtcagggtggtgcgagcctgggagctggtcttagcgaggctatcagctcggctcgtcct
acctcgtacagccgtagcgaccgtctcaagcagtacgtggagagcggcgggcgcagtctt
ggcttgggcagcggatatggccgtcgcttcgatgatgacgagaagagtgtcagcacagcg
tttgctagtcaaattgggacagggttcgactga
DBGET
integrated database retrieval system
