Podospora bellae-mahoneyi: QC761_304250
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Entry
QC761_304250 CDS
T09795
Symbol
NMD2
Name
(RefSeq) mRNA decay protein
KO
K14327
regulator of nonsense transcripts 2
Organism
pbel
Podospora bellae-mahoneyi
Pathway
pbel03013
Nucleocytoplasmic transport
pbel03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pbel00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
QC761_304250 (NMD2)
03015 mRNA surveillance pathway
QC761_304250 (NMD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbel03019
]
QC761_304250 (NMD2)
Messenger RNA biogenesis [BR:
pbel03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
QC761_304250 (NMD2)
mRNA cycle factors
P-body specific factors
QC761_304250 (NMD2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
87897052
NCBI-ProteinID:
XP_062733354
UniProt:
A0ABR0FK74
LinkDB
All DBs
Position
3:complement(1471159..1476290)
Genome browser
AA seq
1145 aa
AA seq
DB search
MDRARRRELRELNQRAWNGEKDLFPVGKPLDSTMKKNTAFIKRLRTAISPATMNTFLQEI
KTVSLSKYLSEIVSACHEGLCKLKSPGEIEAGVEIVSALHQRFGPDEFTMYLGWYLGKAM
ATPDKSFLKTLSAEAKEKEERDRLTRQRVLLRVVTELWLVGILKTLDDIKRPDDAANGTT
GKTTEVKSRAAAKGGAAEPFPLEVLKDLLGHDREHANLPLLVIFVKAFSWDVLGVKSDSR
KTVGEDGTTKEDETNEEQDGTTEEDAPFTSPELQERFRNVLRRYFEDVKGHLVRDQKAIY
SQSRKNAEAYVKSGEVFEDRQANFEKQVKAQERLVANAHVIAEIIGAEMPELKDSDDANA
NANGSIGIVKAGEYLRGQGDGSGIWEDEEERRFYENLVDLKGKVPGMLLEEVKKKKAEDE
QVGKKIDPAEVEAKQAEAAVDEQSMAIANKTIGAQVDALLARLPDLTSKDAIDQTAIDFC
FLNSKASRNRLIKALTDVPKGRGDLLPSWSRLVATLGQYMPDIPKGLVDYLDAEFRSLQR
RKEKEFLGQVRLGNIRYLAELTKFGIVPEHVVFHCLKVSLDDFSRMNIEIICNLLENCGR
YLLRNPETSPRMASFLETLQRKKSVQHIGQAERMLIENAVYYVDPPQRPAIQQKERTPIE
LFVRKLVYTDLTKRNYSKVVRQIRRLHWEEKEVVTILHKVLSKPGKVKYSNIHLLVVILS
AIHRYHNEFVISVIDTVIESVVFGLEQNNFEFNQRRIAEVKYLAEMYNYRMLDHPVIFEI
MYKIMTFGHGGPPIPGRLVSFDMPDDFFRIRLIATILETCGVFFNKGAAGKKLDYFLSFF
QYYIYTKDPLPMDIEFLVHDIFSLTRPQWKLASNLEEASEVFRLAVIQDHKTSGMDKIAE
QDDRTSAMSSDDEDGNDLQAGEQDDDDDEDAASDEGEVEESEHHGSYANSEYEEEEEIVV
TREEEEVDPEYEEEFEREYAKMMAESFGDARKFERKPQFDIPLPVRPKAREATGGEPAET
ATTNPGGTMAFSLLTKKGNRQQTRTVELPSDSNFAVALINQRQAAKEEQQRIKNLVLNYD
LRENEENDGTTTLRDPLQLYSNIYNRAGNEKTNSYHHHNRIDNRAAKERGGQRVRKLQLS
DVDWT
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcgcgcgcagacgcgagctgcgcgagctcaaccagagggcctggaatggagag
aaggatctctttcccgtgggtaagcccctggactcgaccatgaagaagaataccgccttc
atcaaacgtctccgtaccgcaattagccccgcgaccatgaacacctttctccaggagatc
aagactgttagcctctccaagtatctctccgaaatcgtctccgcctgccacgaaggcctt
tgcaaactcaaatcccccggcgagatcgaagccggcgtcgaaattgtcagcgccctccat
cagcgcttcggtcccgacgagttcaccatgtatctgggctggtatctcggcaaggctatg
gctacaccagacaagagcttcctcaaaaccctctcggccgaagccaaagaaaaggaggaa
cgcgaccgtctgacccgtcagcgtgtcctcctgcgcgtcgtgaccgagctttggcttgta
ggcattctcaaaaccctcgacgacatcaagcggcctgacgacgctgcaaacggaaccacg
ggcaagaccactgaggtcaagtcccgagcagctgccaagggaggtgctgccgaaccgttc
cctctggaagttctgaaggatctcctgggccacgaccgtgaacatgcaaatttgcctctg
ctggtgattttcgtcaaggcttttagctgggatgttttgggagtcaagtctgatagtcga
aaaacagtcggggaagatggcaccaccaaagaggacgagacaaacgaagagcaggatggc
acgacggaggaagatgctcccttcacttctcccgagctccaagagcgctttagaaacgtc
ctcaggcgatattttgaggacgtcaagggccatcttgttcgggatcaaaaggccatttac
agccagtctcgcaagaacgccgaggcctacgtgaaatcgggtgaagtctttgaggaccgt
caggcgaactttgagaagcaggtgaaggcccaggagcgccttgtggccaacgcccatgtg
atcgccgaaatcattggggctgagatgcccgagttgaaggatagcgatgacgccaacgca
aacgcgaacggctcgatcggcatagtaaaggcgggagagtacctccgtggacaaggcgat
ggctccggtatctgggaggacgaggaggaacgtcgcttttacgaaaacctggttgatctt
aagggcaaggttcccggcatgcttcttgaagaggtcaagaaaaagaaggccgaggacgag
caagtcggtaagaagatcgatccggccgaggttgaggcgaagcaggcggaggctgcagtt
gatgagcagtccatggccattgcgaacaagactattggtgctcaggttgatgctcttctt
gctcggcttccggatctcaccagcaaggatgccattgaccaaaccgccatcgacttttgc
tttctcaactccaaggcttctcggaacaggcttatcaaggccctcacagatgtgcccaaa
gggcggggcgatctccttcccagctggtctaggcttgtcgctacccttggccaatacatg
ccagacattcccaaaggtcttgtggactatcttgatgccgagttccgcagcctccaacgc
cgcaaagagaaggagttcttgggccaggtcagacttggcaatatccgctatcttgccgaa
ctgaccaagtttgggattgtccctgaacacgtcgttttccattgcctcaaggttagtctg
gatgatttctctcgaatgaacatcgagatcatctgcaacctcttggagaactgtggccga
tacctgctccgcaacccagagacgtcgcctcgcatggcctccttcctggagactctccag
cgcaagaaatctgttcagcatattggacaagccgagcgcatgcttatcgagaacgccgtg
tactatgtcgatcctcctcaacggccggccatccagcagaaggagagaacccccatcgag
ctctttgtccggaagctggtctacacggatctgaccaagcgcaactacagcaaggttgtc
cggcagatccgcaggcttcactgggaagaaaaggaggttgtgacaatccttcacaaggtt
ctttccaagcccggaaaggtcaagtacagcaacatccatcttctcgtcgtcattctgagc
gccattcaccgctatcataacgagttcgtgatcagcgttattgacaccgtcatcgaatct
gttgtgtttgggcttgagcagaacaactttgaattcaaccagcgcagaattgccgaagtc
aaatacctggcagagatgtacaactacaggatgctcgaccatcctgtaatctttgagatc
atgtacaagatcatgacctttgggcatggaggaccgcccatccccggccgtctcgtatcc
tttgacatgccagacgactttttccggatccgcctgattgcgacaatcctggagacctgc
ggtgtgttcttcaacaaaggtgcagccggcaagaagctggattatttcctctccttcttc
cagtactacatctacaccaaggaccccctgccgatggacattgagtttttggtacatgac
atcttctcgctcactcgtcctcagtggaagcttgcttcgaacttggaggaagcctcggaa
gtcttccggctggccgtcattcaagatcacaaaacctcaggcatggacaagattgccgag
caggacgacagaactagtgctatgtcgagcgacgatgaggatggcaatgatcttcaggcc
ggagagcaagacgatgatgacgacgaggacgcggcttccgatgaaggcgaggtcgaggaa
tctgagcatcacggctcctatgccaacagcgaatatgaagaagaggaggagattgtggtc
accagagaagaggaggaagtcgatcctgaatacgaggaagagtttgagcgggagtatgcc
aagatgatggctgagagctttggggatgcgcgcaagttcgagcgcaaacctcagttcgat
attcccctccccgtccgcccgaaagcccgtgaggctacaggaggcgagcccgccgagacg
gccacgaccaacccaggcggcactatggccttctctttgctcacgaagaagggaaaccgt
caacagacacggactgttgaactgccttctgattccaactttgccgtggctctgatcaac
caacgccaggcagccaaggaggaacagcagcgcatcaaaaaccttgtcctcaactacgat
ctccgcgagaatgaggaaaacgacggtactaccaccctccgggacccccttcaactatac
agcaatatttacaaccgtgcaggcaacgagaaaaccaattcgtatcaccaccacaaccgc
atcgacaacagagccgccaaggagcgcggtggacagcgcgtccgcaagctccaactcagc
gacgtcgactggacatga
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