Podospora bellae-mahoneyi: QC761_306570
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Entry
QC761_306570 CDS
T09795
Symbol
PCF11
Name
(RefSeq) mRNA 3' end processing factor
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
pbel
Podospora bellae-mahoneyi
Pathway
pbel03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pbel00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
QC761_306570 (PCF11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbel03021
]
QC761_306570 (PCF11)
03019 Messenger RNA biogenesis [BR:
pbel03019
]
QC761_306570 (PCF11)
Transcription machinery [BR:
pbel03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
QC761_306570 (PCF11)
Messenger RNA biogenesis [BR:
pbel03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
QC761_306570 (PCF11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
Pcf11_C
zf_PCFS4
Pfc11_Clp1_ID
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
87897280
NCBI-ProteinID:
XP_062733605
LinkDB
All DBs
Position
3:complement(2218141..2221144)
Genome browser
AA seq
764 aa
AA seq
DB search
MEDHGEEVAADFREALQDLTTNARFEIVTLTNIARENADHGLAISEVLTNHIKEAPASKT
LPALYVLDSIVKNVPTPYALYFGPKLYQIFMGSYTKVDNATRRKMDEMLKTWKEPVAGSI
SKKPVFPLELVRPIENALLAARNAYMEQAKFQTHLMRGRPAGPPARDTPTPPMGRAYQPP
PPPPHGQPPYQGPPNGQYPPPGEQAYPMRSGNTPNGVPNHATPPQPPPSAEPYAHYQPPP
NQGPYGVPPAPGINIDKLKDDIQQLIELDRAGFAQNMHDASKQNRLKALLDLQKVVQSQN
LPQEQLMIISDQVAKLAVNMRAAQAQPPPSYPPALPPPYNTHTPTPPVVTQQFAPPPVAA
AAPPPSVLPQLPAVLAAALGRPASNVAPLPVAAAPPPPVRPATTAGGAASGTLSLDAILG
QGALAALLAAKKPATPQQSSTAPVPPAAAVPPALAALRSPPQQAAPFQPPPAPPVAQQQP
PAAAANPLTQNPSALLAMLRQSGLLGGTPGVPTLPPAIPSLPPPDPNIITLTPSSLKFPR
LHLLSYLLDHLGPPCSQCGRRFPITEEGRKKKTQHMDWHFRVHQRVAGAEQRGQHRSQFV
SELDWIQSHEEPDVDYNAPSGGGGSGDGDGSESDDNDWSAAVKGGRRKKNEKKKRWITAP
DEGDGTGTGTNKVCPICQEKFQSRYLEEVQDWVWMDAVVVGSGQGRRVFHGTCWDEVNTG
GGGGGQGQGTMVMLGNSNNKRKMEEDGGGEGEEEVRGGIKRLMR
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggaagaccacggcgaagaagtggcggccgatttccgtgaggcgctccaggacttgacc
accaatgctcgctttgaaatcgtcacattgaccaacatcgcccgagagaacgccgaccat
ggtctggccatttcagaggtcctcacaaatcacatcaaagaggcacccgcctccaaaacc
ctacccgccctctacgtcctggactcgatcgtgaagaatgttccgactccctacgcccta
tatttcggccccaagctctatcaaatcttcatgggttcctacaccaaagtcgacaacgcg
acacggagaaagatggacgaaatgctgaagacatggaaggaacctgtagccgggtccatc
tccaagaaaccggtcttcccacttgaattggttcgacccattgagaacgctctgctggct
gcccgcaatgcctacatggagcaagccaaattccagacccatctcatgcgagggcgtccg
gccggcccgcctgccagagatacgccgacacctcctatgggcagagcttaccaaccacca
ccaccaccaccacatggacagcccccatatcagggaccacctaatggacagtacccgccg
cctggagaacaagcctatcccatgcgctccgggaacacacccaatggcgtccctaaccat
gctacgccaccgcagcctcctccatcagccgagccatatgctcactaccagccacctccc
aaccaaggtccctatggtgttcctccggctccaggaataaacatagacaagttgaaagat
gatatccagcagttgatcgagctggacagggcgggttttgcccagaacatgcatgatgct
agtaaacaaaacagactgaaggctttgctggatttgcaaaaagtagtccagagccaaaac
ctgcctcaggagcagttgatgatcataagcgatcaagttgctaaacttgctgtaaacatg
cgcgctgcccaggcgcagccaccgccatcatatcctcctgctctgccaccaccatacaac
acgcacaccccaacacctcctgttgtaactcaacagtttgcacctcctccagttgctgcc
gctgctcctccaccttcggtactgccccaattaccagcggtactagcggcggctctggga
cgtccggcatcaaatgttgctcccctgcccgtggcagcggcaccaccaccaccagtccgt
ccggcaaccaccgcaggaggtgccgcttcgggaacactatctctcgatgcgattcttggc
cagggcgctctggctgcgcttttggcggccaagaaacctgccacccctcaacagtcatct
actgcgccggttccgccggcggcggctgtaccacctgctttggccgcgctgcggtcacca
ccacaacaagcagctccatttcaaccaccaccagcaccaccagttgctcaacaacaaccg
cccgctgcggcagccaacccgttgacacagaacccatcggctttattggctatgctacgg
cagtccggccttctcggcggcacccccggcgtacctacactaccacccgccatcccatct
ctcccacccccggatccgaacatcataactctcaccccttcctctctcaaattcccccgc
ttgcatctgttgtcttatctcctcgatcacctcggccctccctgctcccagtgcggccgc
cgcttccccatcacggaagaaggcagaaagaagaagacgcagcacatggactggcacttt
cgtgttcatcagcgtgttgctggggctgagcaaaggggtcagcaccggtcgcagtttgtg
agcgagcttgattggattcaaagtcacgaggagccggatgtggattataacgcccccagc
ggcgggggcgggtcaggagacggggatgggagcgagagtgatgataatgattggtctgct
gcggtaaaaggggggaggaggaagaagaatgagaagaagaagaggtggatcaccgcgcct
gatgagggggatgggacggggacggggacgaacaaggtctgcccgatctgccaggagaaa
ttccagagtaggtatctggaggaggtgcaggattgggtttggatggatgcagttgttgtt
ggatctgggcaggggaggagggtgtttcatgggacttgttgggatgaggttaatactggt
gggggagggggagggcaggggcaggggacaatggtgatgttggggaatagcaacaataag
aggaagatggaggaggatggggggggggagggggaggaggaggttaggggggggattaag
aggttgatgaggtga
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