Podospora bellae-mahoneyi: QC761_308610
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Entry
QC761_308610 CDS
T09795
Symbol
RRP42
Name
(RefSeq) Exosome complex component rrp42
KO
K12589
exosome complex component RRP42
Organism
pbel
Podospora bellae-mahoneyi
Pathway
pbel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QC761_308610 (RRP42)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbel03019
]
QC761_308610 (RRP42)
Messenger RNA biogenesis [BR:
pbel03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
QC761_308610 (RRP42)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
QC761_308610 (RRP42)
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Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Cwf_Cwc_15
DUF5304
Motif
Other DBs
NCBI-GeneID:
87897488
NCBI-ProteinID:
XP_062733833
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Position
3:complement(2972986..2974662)
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AA seq
376 aa
AA seq
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MASSTNVHLSPAELSYLHTSLSLNPPIRPDGRSPTQYRPLSAETGILPGTNGSARICFAD
GTEAIVGVKAEVEKTRRRWDDDTIFGENQNQEEGEERDEGEEQGSSDWVELTVEIPGYRD
DDSGTVFLGQMLCEALLADGGFVRRLRINRRFHWKVYLDILLISPPLSYPLPLLSLTTHL
ALLATRLPKLKSEGDEDPFFDDDWAAAPYLYARNPTTKRVTERPPVTLLVMAVGGNVIFD
PSKEELAVADVVLAVSVGDDASSREGRMDVDGRSNNSGRNLKLLSIRTVDPPSRLTPPGV
ANAANSAYGHAQVVSTGANQKMPEARQTESEAVEGVWKPPRGGAKAVVMGALVQKVLVRG
GVADEVLDALEGVDTS
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctccacaaacgtccacctctcccccgccgagctctcctacctccacacctcc
ctcagtctcaacccccccatccgccccgacggccgctcgccgactcagtaccggcctttg
tccgccgagacggggatcctgcctgggacgaacggctcggctcggatctgcttcgcggac
gggacagaggcgatcgtgggggtgaaggcagaagtggaaaagacgaggcggaggtgggat
gacgatactatctttggggagaatcaaaaccaggaagaaggagaagaacgagatgagggg
gaggagcaggggagtagtgattgggttgagctcacggttgagattccggggtacagggac
gatgatagtgggacggtgtttttggggcagatgctttgtgaggcactgcttgctgatggg
gggtttgtgaggcggttgaggattaatagacggtttcattggaaggtttatcttgatatt
ttgttgatcagcccgccgctttcgtatccgcttccattgctgtcattaacaacccacctc
gcccttctggccacccgcctccctaaactcaagtcagaaggggatgaagacccgtttttt
gacgacgactgggctgcggcgccgtatctgtacgcacgaaacccgaccacgaaaagagtt
accgaacgcccgcctgtgacgttgctggtgatggcggtgggggggaatgtcatttttgat
ccgagcaaggaggagctggcagtggcggatgtggtgctggctgtttcggttggggatgac
gcttcgtcgcgagagggtaggatggatgtggatgggaggagcaacaactcgggcaggaat
ctgaagctgttgtctatcaggacggtggacccgccttcgagactgacgccgccgggggtg
gccaacgcggcgaatagcgcttatgggcatgcgcaggttgtgagtacgggtgcgaaccag
aagatgcccgaggcgaggcagacggagagcgaggctgtggagggtgtttggaagccgcct
aggggtggtgccaaggctgttgtgatgggggcgttggtgcaaaaggtgctggttagaggt
ggggtggcggatgaggtgctggatgctttggagggggttgacacttcttga
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