KEGG   Podospora bellae-mahoneyi: QC761_308610
Entry
QC761_308610      CDS       T09795                                 
Symbol
RRP42
Name
(RefSeq) Exosome complex component rrp42
  KO
K12589  exosome complex component RRP42
Organism
pbel  Podospora bellae-mahoneyi
Pathway
pbel03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pbel00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    QC761_308610 (RRP42)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pbel03019]
    QC761_308610 (RRP42)
Messenger RNA biogenesis [BR:pbel03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     QC761_308610 (RRP42)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     QC761_308610 (RRP42)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C Cwf_Cwc_15 DUF5304
Other DBs
NCBI-GeneID: 87897488
NCBI-ProteinID: XP_062733833
LinkDB
Position
3:complement(2972986..2974662)
AA seq 376 aa
MASSTNVHLSPAELSYLHTSLSLNPPIRPDGRSPTQYRPLSAETGILPGTNGSARICFAD
GTEAIVGVKAEVEKTRRRWDDDTIFGENQNQEEGEERDEGEEQGSSDWVELTVEIPGYRD
DDSGTVFLGQMLCEALLADGGFVRRLRINRRFHWKVYLDILLISPPLSYPLPLLSLTTHL
ALLATRLPKLKSEGDEDPFFDDDWAAAPYLYARNPTTKRVTERPPVTLLVMAVGGNVIFD
PSKEELAVADVVLAVSVGDDASSREGRMDVDGRSNNSGRNLKLLSIRTVDPPSRLTPPGV
ANAANSAYGHAQVVSTGANQKMPEARQTESEAVEGVWKPPRGGAKAVVMGALVQKVLVRG
GVADEVLDALEGVDTS
NT seq 1131 nt   +upstreamnt  +downstreamnt
atggcctcctccacaaacgtccacctctcccccgccgagctctcctacctccacacctcc
ctcagtctcaacccccccatccgccccgacggccgctcgccgactcagtaccggcctttg
tccgccgagacggggatcctgcctgggacgaacggctcggctcggatctgcttcgcggac
gggacagaggcgatcgtgggggtgaaggcagaagtggaaaagacgaggcggaggtgggat
gacgatactatctttggggagaatcaaaaccaggaagaaggagaagaacgagatgagggg
gaggagcaggggagtagtgattgggttgagctcacggttgagattccggggtacagggac
gatgatagtgggacggtgtttttggggcagatgctttgtgaggcactgcttgctgatggg
gggtttgtgaggcggttgaggattaatagacggtttcattggaaggtttatcttgatatt
ttgttgatcagcccgccgctttcgtatccgcttccattgctgtcattaacaacccacctc
gcccttctggccacccgcctccctaaactcaagtcagaaggggatgaagacccgtttttt
gacgacgactgggctgcggcgccgtatctgtacgcacgaaacccgaccacgaaaagagtt
accgaacgcccgcctgtgacgttgctggtgatggcggtgggggggaatgtcatttttgat
ccgagcaaggaggagctggcagtggcggatgtggtgctggctgtttcggttggggatgac
gcttcgtcgcgagagggtaggatggatgtggatgggaggagcaacaactcgggcaggaat
ctgaagctgttgtctatcaggacggtggacccgccttcgagactgacgccgccgggggtg
gccaacgcggcgaatagcgcttatgggcatgcgcaggttgtgagtacgggtgcgaaccag
aagatgcccgaggcgaggcagacggagagcgaggctgtggagggtgtttggaagccgcct
aggggtggtgccaaggctgttgtgatgggggcgttggtgcaaaaggtgctggttagaggt
ggggtggcggatgaggtgctggatgctttggagggggttgacacttcttga

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