KEGG   Podospora bellae-mahoneyi: QC761_402660
Entry
QC761_402660      CDS       T09795                                 
Symbol
rrp4
Name
(RefSeq) Exosome complex component rrp4
  KO
K03679  exosome complex component RRP4
Organism
pbel  Podospora bellae-mahoneyi
Pathway
pbel03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pbel00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    QC761_402660 (rrp4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pbel03019]
    QC761_402660 (rrp4)
Messenger RNA biogenesis [BR:pbel03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     QC761_402660 (rrp4)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     QC761_402660 (rrp4)
SSDB
Motif
Pfam: RRP4_S1 ECR1_N KH_6 RRP40_S1 ECR1_N_2
Other DBs
NCBI-GeneID: 87898027
NCBI-ProteinID: XP_062732036
LinkDB
Position
4:complement(1149969..1151042)
AA seq 357 aa
MPITILPPKPSHPPPSPHDISDSDSDLSSDDGGGGAHLDFASLGLPSHQKSTHPSNNLLF
TNLVTPGTLITPDPQWMRGHGTYIPPSTTNITSSLAGITTRTNKLISVSPLRARYTPEVG
DLVVGRILEVQAKRWRVDINSIQLASLPLSAINLPGGILRKRTETDELQIRTFFAEGDLV
VAEVQQLFQDGGAVLHTRSLKYGKLRNGLFVALSGQGGGSGVVRSRRQVWTMEGQNGGGK
MDVILGVNGYVWISKHVEQVAKELEQKHMGITNMEENVSAGVYSSQNDFIDSATMREIAR
LRNVVTALVENGCRVDEDMVIRGYAEACEMAMLGETGAEDIYLGGQRGEELTRALRN
NT seq 1074 nt   +upstreamnt  +downstreamnt
atgcccatcacaatcctcccccccaaaccctcccacccacccccttccccccacgacatc
tccgattccgattccgacctctccagcgacgacggcggaggaggcgcccacctcgacttc
gcctccctcggcctgccctcccaccaaaaatccacccacccctccaacaacctcctcttc
accaacctcgtcacccccggtaccctcatcaccccagacccccaatggatgcgcggccac
ggcacctacatcccccccagcaccacaaacatcacctcctccctcgccggcatcaccacc
cgcaccaacaagctcatctccgtctcccccctccgcgcccgctacacccccgaggtaggc
gacctagtagtaggccgcatcctcgaagtccaagccaagcgctggcgcgtagacatcaac
tcgatccagctcgcctccctccccctctcagccatcaacctccccggcggcatcctccgc
aagcgcacagaaaccgacgagctccaaatccgcaccttcttcgccgagggcgacctcgtc
gtcgccgaagtgcagcagctcttccaggacggaggcgcagtcctccacacgcgctcgctc
aaatacggaaaactccgcaacggcctgtttgttgctctttctgggcagggcggcgggtcc
ggggtagtacggtcgaggagacaggtctggacgatggaggggcagaacggaggggggaag
atggatgttatactgggggtgaatggttacgtctggatcagcaagcatgttgagcaggtg
gccaaggagctggagcagaagcatatggggattacgaatatggaggagaatgtcagcgcg
ggggtgtacagcagtcagaatgactttattgacagcgctaccatgagggagattgccaga
ctgaggaacgtcgtgacggcgttggtggagaatgggtgcagggtggatgaggatatggtg
atacgggggtatgccgaggcttgtgagatggccatgttgggagagacgggggcggaggat
atctatttgggcgggcagaggggggaggagttgacaagagcgttgaggaactga

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