Podospora bellae-mahoneyi: QC761_402660
Help
Entry
QC761_402660 CDS
T09795
Symbol
rrp4
Name
(RefSeq) Exosome complex component rrp4
KO
K03679
exosome complex component RRP4
Organism
pbel
Podospora bellae-mahoneyi
Pathway
pbel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QC761_402660 (rrp4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbel03019
]
QC761_402660 (rrp4)
Messenger RNA biogenesis [BR:
pbel03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
QC761_402660 (rrp4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
QC761_402660 (rrp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
RRP40_S1
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
87898027
NCBI-ProteinID:
XP_062732036
LinkDB
All DBs
Position
4:complement(1149969..1151042)
Genome browser
AA seq
357 aa
AA seq
DB search
MPITILPPKPSHPPPSPHDISDSDSDLSSDDGGGGAHLDFASLGLPSHQKSTHPSNNLLF
TNLVTPGTLITPDPQWMRGHGTYIPPSTTNITSSLAGITTRTNKLISVSPLRARYTPEVG
DLVVGRILEVQAKRWRVDINSIQLASLPLSAINLPGGILRKRTETDELQIRTFFAEGDLV
VAEVQQLFQDGGAVLHTRSLKYGKLRNGLFVALSGQGGGSGVVRSRRQVWTMEGQNGGGK
MDVILGVNGYVWISKHVEQVAKELEQKHMGITNMEENVSAGVYSSQNDFIDSATMREIAR
LRNVVTALVENGCRVDEDMVIRGYAEACEMAMLGETGAEDIYLGGQRGEELTRALRN
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcccatcacaatcctcccccccaaaccctcccacccacccccttccccccacgacatc
tccgattccgattccgacctctccagcgacgacggcggaggaggcgcccacctcgacttc
gcctccctcggcctgccctcccaccaaaaatccacccacccctccaacaacctcctcttc
accaacctcgtcacccccggtaccctcatcaccccagacccccaatggatgcgcggccac
ggcacctacatcccccccagcaccacaaacatcacctcctccctcgccggcatcaccacc
cgcaccaacaagctcatctccgtctcccccctccgcgcccgctacacccccgaggtaggc
gacctagtagtaggccgcatcctcgaagtccaagccaagcgctggcgcgtagacatcaac
tcgatccagctcgcctccctccccctctcagccatcaacctccccggcggcatcctccgc
aagcgcacagaaaccgacgagctccaaatccgcaccttcttcgccgagggcgacctcgtc
gtcgccgaagtgcagcagctcttccaggacggaggcgcagtcctccacacgcgctcgctc
aaatacggaaaactccgcaacggcctgtttgttgctctttctgggcagggcggcgggtcc
ggggtagtacggtcgaggagacaggtctggacgatggaggggcagaacggaggggggaag
atggatgttatactgggggtgaatggttacgtctggatcagcaagcatgttgagcaggtg
gccaaggagctggagcagaagcatatggggattacgaatatggaggagaatgtcagcgcg
ggggtgtacagcagtcagaatgactttattgacagcgctaccatgagggagattgccaga
ctgaggaacgtcgtgacggcgttggtggagaatgggtgcagggtggatgaggatatggtg
atacgggggtatgccgaggcttgtgagatggccatgttgggagagacgggggcggaggat
atctatttgggcgggcagaggggggaggagttgacaagagcgttgaggaactga
DBGET
integrated database retrieval system