Podospora bellae-mahoneyi: QC761_503880
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Entry
QC761_503880 CDS
T09795
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
pbel
Podospora bellae-mahoneyi
Pathway
pbel03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pbel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
QC761_503880 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbel03400
]
QC761_503880 (MSH6)
DNA repair and recombination proteins [BR:
pbel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
QC761_503880 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_23
DUF5740
AAA_21
ABC_tran
AAA_27
AAA_29
Motif
Other DBs
NCBI-GeneID:
87899093
NCBI-ProteinID:
XP_062730758
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Position
5:1446059..1449875
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AA seq
1215 aa
AA seq
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MGDKTAARTPAKTPSTAKKQGQAPSTGKQQSILGFFSKTPASSANAPNSSPSVKPTPSLK
KASSSQCLQETTKSNSARRPPDATPVPSSDVPEPTSSQENRDVSTAKVSKSRTTMRDTTT
LPSSPSRKVKKAVNYAELSDEEDEEFIASLTSRKSRQRRPRAAVIDEDDEDTYEAGANEV
EEEDDEMEDFVVSDDSDAPSRSKKRKRPAAKTSAPRKKTTNPSPPRSAALDVDGDEPMED
VPPSTSTAQKWKYDPDSIDHEEPQETVVKAPPAAKKPSSTPKPKPKAHTQEPEKRYPWLA
NILDGNKKPPTDPEFDPTSIYIPPAAEKQFSAFEKQYWDIKKNLWDTVVFFKKGKFYELY
ENDATIGHQLFDLKMTDRVNMRMVGVPESSLDMWVNQFVAKGFKVARVDQMESALGKEMR
ERDAKAKKADKIIRRELACILTAGTLVDGSMLQDDMATYCAAIKESVVDGKPCFGIAFVD
AATGQFLISEFEDDVDLTKFETFVAQTCPRELVLEKSRLSTKALRILKNNTAPTTIWNYL
KPGAEFWDAETSRRELECNGYFSNADNQEEVWPEKLEKVKEKDLLMSALGGLVHYLRFLK
LERSLLSQGNFEPYNPIHRNGTLILDGQTLINLEIFSNTANGGVEGTLFNLLNRCITPFG
KRLFRQWVCHPLCNIQKINERLDAVDMLSNDKSALAEFSSHMSKMPDLERLISRIHAGSC
RPEDFVRVLEGFEQIDYTMNFLGAFGSGNGLVDRLISCMPDLKEPLGYWETAFDRKKARD
SKVLIPERGIEEDYDNSEDELNRIKEELAQLLEKQKTALKCRQLKFTDVGKEVYQIEVPK
SVKVPSSWRQMSATAAVKRYYFRELESLVRELQETEETHSQIVKEVASRFFKKFDADYEV
WLQAIRIISQLDCLMSLAKSSLALGLPSCRPEFVDDERSVLHFEELRHPCMINRVDDFIP
NNIHLGGEQAKINLLTGANAAGKSTVLRMTCTAVIMAQIGCYVPAVSAKLTPVDRIMSRL
GANDNIFAAQSTFFVELSETKKILAEATSRSLVILDELGRGTSSYDGVAVAQAVLHHVAS
HIGCVGFFATHYHSLATEFENHPEIRARRMQIHVDGGNRRVTFLYKLEDGVAEGSFGMHC
AAMCGIPNKVIEEAEVAAKEWEHTSRLKESLERAKTGCYIPLGVLSDVASLLRVGGEAEV
QERGVEVLLRAIEAL
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgggagacaagacagcagcccgcaccccggcaaagacgccgtctacagctaagaaacag
ggacaggcgccgtcaacgggcaagcagcagagcattctcggcttcttttctaagacacca
gcaagcagtgccaatgctcccaattcttcgccctcggtcaagccgacaccttccctcaag
aaagccagctcctcgcaatgcctccaggagacaaccaagtccaactctgcgcgacgacca
cccgatgctacacctgtccccagcagtgacgtccctgagccgaccagctctcaggaaaac
agagacgtcagcactgccaaggtgtcaaaatcgaggacgaccatgagggacaccacgacg
ctgcctagcagcccttcccgaaaggtcaaaaaagccgtcaactatgccgaattatccgac
gaagaagatgaggagtttatcgcctcattgacatctcggaagagccgacagcgccgcccg
cgtgcggcggtcatcgacgaggatgatgaggacacgtacgaggcaggcgccaatgaagtt
gaagaggaggacgacgaaatggaagactttgtagtttcggacgactcagatgctccatcc
agatcgaagaagaggaaacggccagctgccaaaacctctgcgccacggaagaagaccacc
aacccatcgccgcctcgttcagctgctctagacgtggacggtgacgagccaatggaagac
gtccccccgtcgacgtccaccgcacagaagtggaaatacgaccctgacagcatcgatcat
gaggagccacaggagacggtcgtcaaggcccctccagctgcgaagaagccgtcgtcaaca
cccaaaccgaaaccgaaagcccacactcaggaacccgagaagagatatccctggctggcc
aacatcctggatggcaacaaaaagccaccaaccgacccagagttcgatcccacgtccatc
tacatcccaccggcagcggagaagcagttctctgcctttgagaagcagtactgggacatc
aagaagaatctctgggataccgtcgtgttcttcaagaagggcaagttctacgagctgtac
gaaaatgatgcaaccattggtcaccagttgtttgatctgaagatgacagaccgcgtcaac
atgcgcatggtgggtgtccctgagagctcactcgatatgtgggtcaaccagttcgtcgcg
aaaggcttcaaggtcgctcgtgtagaccagatggagtccgcgcttggcaaggagatgcgt
gagcgtgacgcaaaggccaagaaggcggacaagatcatccgacgtgagcttgcttgcatc
ttgactgccggcaccctggtggacggcagcatgctccaggatgatatggccacatactgc
gcagccatcaaggagtctgttgtggatggcaagccttgctttggcattgcgtttgtggat
gccgccactggtcagtttttaatatccgagtttgaggatgatgtcgacctcaccaagttc
gagacctttgttgcccagacatgccctcgggaactggtgctggaaaagtcgcggctgtcc
accaaggcgctccgcatcctcaagaacaacactgcacctaccaccatctggaactatctc
aaacccggcgccgagttttgggatgctgagacgtcgaggcgcgaactggagtgcaacggt
tacttctccaacgctgacaaccaggaggaagtctggccggagaagctcgagaaggtcaag
gagaaggacctcttgatgtcggctcttggcgggctggttcattacctgcgcttcctcaag
ctcgaacggagcttgctctcgcaagggaactttgaaccatacaatccaatccaccgcaac
ggcacgctcatcttggacggccagaccctcatcaacctcgagatcttctccaacacggcc
aacggtggcgtggaaggaacgctttttaacctcctcaacaggtgtattacgccgtttggg
aagcgtctcttccggcagtgggtttgccacccgctctgcaacatccagaagatcaacgaa
cgtcttgatgcggtggacatgctcagcaacgacaagagtgcgcttgccgagttctcgtcc
cacatgagtaagatgcccgacctggagcgattgatctcgcgcatccacgccggctcctgc
agacctgaagactttgtccgtgttctcgagggctttgagcagattgactacaccatgaac
ttccttggcgcttttgggagtggcaatgggctggtggaccggctcatttcttgcatgccg
gatctcaaagagccccttggttactgggagacggcctttgacaggaagaaggctcgcgac
agcaaggttctcatccccgagcgggggatcgaggaggattatgacaacagcgaggacgag
ctgaaccgcatcaaggaagagttggctcagctgctcgagaagcaaaagacggccttgaag
tgcaggcaactcaagttcaccgacgtcggcaaggaggtgtaccagattgaagtgcccaag
tcggtcaaggtgccttcgagttggcgccagatgtcggctacggccgctgtcaagcggtac
tacttccgagagctggaaagccttgtccgtgagctccaggaaaccgaggagacgcactcc
cagatcgtcaaggaggtcgcgtcaaggttctttaagaaattcgacgctgattacgaggtg
tggttgcaggccattcgcatcatctcgcagctggactgcctgatgagcttggccaagtcg
tctcttgccctcggccttcccagttgccgtccggagtttgttgatgacgagcggagcgtc
ttgcactttgaggagctccgtcacccgtgcatgatcaacagggtggacgactttattcca
aacaatatccacctcggcggcgagcaggccaagattaaccttcttaccggtgccaacgcg
gctggaaagtcgactgttcttcgaatgacttgtactgccgtcatcatggcccagattggc
tgttacgtcccggctgtgtcggccaagttgacgcctgtcgaccgtatcatgtctcgtctc
ggcgccaacgacaatatttttgccgcccaaagcaccttctttgttgagctgtccgaaacc
aagaagattctggccgaggctacgtcccgctcccttgttattcttgacgagctcggacgt
ggcacctcttcgtatgatggcgtggctgtcgcccaagctgttcttcaccatgtggcatcc
cacattggttgtgttggcttctttgctacccactaccacagcctggcaaccgagtttgag
aaccaccctgagatccgggcgcggaggatgcagattcacgtcgacggtgggaaccggcga
gtgacgttcttgtacaaactagaggacggtgttgcagagggatcgtttggaatgcactgt
gctgccatgtgcggtattcccaacaaggtcatcgaggaggccgaggtggcggccaaggag
tgggagcacaccagccggttgaaggaaagcttggagagggccaagacggggtgttacatc
cctctcggagtgctgagcgatgtggcaagcttgcttagggttggtggtgaggcagaagtg
caggagcggggggtggaggtgctgttgcgagccattgaggcgctctga
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integrated database retrieval system
