Podospora bellae-mahoneyi: QC761_602190
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Entry
QC761_602190 CDS
T09795
Symbol
SYF1
Name
(RefSeq) pre-mRNA-splicing factor syf1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
pbel
Podospora bellae-mahoneyi
Pathway
pbel03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
QC761_602190 (SYF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbel03019
]
QC761_602190 (SYF1)
03041 Spliceosome [BR:
pbel03041
]
QC761_602190 (SYF1)
Messenger RNA biogenesis [BR:
pbel03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
QC761_602190 (SYF1)
Spliceosome [BR:
pbel03041
]
Complex B
Other components
Prp19-related factors
QC761_602190 (SYF1)
Complex C
QC761_602190 (SYF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
Mad3_BUB1_I
TPR_15
TPR_8
RPN7
ARM_TT21
NRDE-2
Motif
Other DBs
NCBI-GeneID:
87900156
NCBI-ProteinID:
XP_062729478
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All DBs
Position
6:complement(1834506..1837705)
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AA seq
822 aa
AA seq
DB search
MALALSSDRQPDLALVSDDDYPYEQDIQRNPGSTKPWLAYIDYKIQHGTLREQAYVMERA
CIQLPRSYKLWKMYLRFRTKHVAKLNAAIFTSEYQKVNALFERALILLNKMPRIWEMYLK
FLMQQPLVTLTRHTFDRALRALPITQHNRIWALYRPFANSAEGLTAVKIWRRYTQVHPED
AEDFIELLIQSELYTEAVKRYIDILNNPRFQSKNGKGHYELWSEMVDLLVEHAVDIETGH
ETGIDVERIIRSGIERFADQRGKLWCGLATYWIRRGSFERARDVFEEGITTVMTVRDFTL
IFDSYTEFEESVIGALMEMASGRAEKGVVDEVADFDLDIRMMRFEHLMDRRPFLLNDVLL
RQNPNNVTEWEKRVALWGDNKQEVVQTYTDAIAAIQPKKAVGAFHQLWVNYAKFYENGGD
IRSARTIMEKAVKVPFKSVAELADMWIEWAEMELRNENFDDAVRIMAKAVQAPKRSNVDY
FDETLSPQQRVHKSWKLWSFYVDLVESVSTLEETKKIYERIFELRIATPQTVVNYANLLE
EHKYFEESFKIYERGLDLFSYPVAFELWNLYLTKAVDRKISIERLRDLFEQAVEDCPAKF
AKVIYLMYGNLEEERGLARHAMRIYERATRAVSDEDRADMFNFYITKSASNFGLPSTRPI
YERAIATLPDNEAKDMCLKFADMEKRLGEIDRARAIYGHGSQFCDPRTNPGFWQKWEQFE
VQHGNEDTFKEMLRIKRSVQAQYNTDVNFIASQALARAQQAKNVEGGGEVDQEVTDAMEQ
LERQARAPAGFVAASEGIKGSVVAPKVVEVANPDAIELDDME
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggcactctcttctgaccgccagcctgatctggcgcttgtgtccgatgatgac
tacccctacgagcaagacatccaacgaaaccccggcagcaccaagccatggctcgcctac
attgactacaagattcaacatgggacacttcgcgagcaagcctacgtcatggagagggca
tgtatccaattgccgcgctcctataagctgtggaaaatgtatttacgattccgaacgaag
cacgtcgcaaagctcaatgccgccatcttcacctccgaataccaaaaggtcaatgcgctc
tttgagcgggcgctgatcctcctcaacaaaatgccgcgcatctgggagatgtacctcaag
ttcctcatgcagcagcccctcgtcaccctcacacgacacaccttcgaccgcgcactccga
gcacttccgattacacaacacaacaggatatgggccttgtaccgaccgttcgccaactcg
gccgagggtttgacggctgtcaagatctggaggcgctacacacaggtccacccggaggat
gccgaagactttatcgaacttttgattcagagcgagctgtacaccgaggcagtcaagagg
tacatcgacattctcaacaacccacgattccagagcaagaatggcaaggggcactatgag
ctttggagcgagatggtggatctgttggtggagcacgctgtcgacattgaaacgggacac
gaaacaggcattgacgtggaacggatcattcggagcggaatcgaacggttcgcggaccag
cgcgggaaattgtggtgcggcctggcaacctactggattcgaaggggcagctttgagagg
gcaagagatgtttttgaggagggcatcacaacagttatgacggtccgggactttacgctc
atttttgactcgtacactgagtttgaggagtctgtcattggggcactgatggagatggcc
tcgggacgggcggaaaagggcgtggtggatgaggtggctgattttgatctggatatcagg
atgatgcgatttgagcatctgatggaccgacgaccgttcctcctgaacgatgtgttacta
cgacagaacccgaacaatgtcaccgagtgggagaagagagttgctctgtggggagacaac
aagcaggaggttgtacagacttatacggatgccatcgctgctattcagccaaagaaggcc
gttggcgcgttccatcagttgtgggttaactatgccaaattctacgaaaacggaggggat
atccggagcgcgaggactatcatggaaaaggcggtcaaggtgcccttcaagtcggtagct
gagctggccgacatgtggatcgagtgggcagagatggaactccgcaacgagaactttgac
gatgccgtccggatcatggccaaagctgtccaagcccccaagagatccaatgtcgactac
tttgacgagacattatctccccaacagcgagtacacaagagctggaagctgtggtcgttc
tacgtcgacctcgtcgagagcgtcagcaccctggaggaaaccaagaagatttacgaaaga
atattcgagctccgcatcgccaccccccagactgtggtcaactacgccaacctactcgag
gaacacaagtactttgaagagtcattcaagatctacgagcgcggccttgatctcttctct
taccccgtagcctttgagctatggaacctctacctaaccaaggccgtcgaccgcaagatc
agtatcgagcgtctgagagatctctttgaacaagccgttgaagactgcccggccaagttc
gccaaggtgatctacctcatgtatggcaacctggaagaggagcgcggtctagcccggcat
gcgatgcgcatttatgagcgggcaacgcgtgccgtgtcggacgaggacagggcagacatg
tttaatttttatattaccaagtcggcctctaatttcggtctcccatccacgcgccctatt
tacgagcgcgccatcgccaccctccccgacaacgaagcaaaggacatgtgcctcaaattc
gcggacatggaaaaacgtcttggggaaatcgaccgggcaagggccatctacggccatgga
tcccagttttgcgatcccaggacaaacccggggttttggcaaaaatgggagcagtttgag
gtgcagcatggcaatgaggacacgttcaaggagatgctgcggatcaagcggtcggtgcag
gcgcagtacaacaccgatgtcaactttattgcctcgcaggcgctggcgagagcacagcag
gccaagaacgtcgaaggaggaggagaggttgatcaggaggtgacggacgcgatggagcag
ctggaacggcaggctcgtgccccggcgggatttgttgcggcgagcgaggggatcaagggg
agtgtggttgctcccaaggtggtcgaggtggcaaacccggatgctatcgagcttgatgat
atggaatga
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