Podospora bellae-mahoneyi: QC761_705800
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Entry
QC761_705800 CDS
T09795
Symbol
VTS1
Name
(RefSeq) Flap-structured DNA-binding and RNA-binding protein
KO
K27407
RNA-binding protein VTS1
Organism
pbel
Podospora bellae-mahoneyi
Brite
KEGG Orthology (KO) [BR:
pbel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbel03019
]
QC761_705800 (VTS1)
04131 Membrane trafficking [BR:
pbel04131
]
QC761_705800 (VTS1)
Messenger RNA biogenesis [BR:
pbel03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
QC761_705800 (VTS1)
Membrane trafficking [BR:
pbel04131
]
SNARE
SNARE associated proteins
Others
QC761_705800 (VTS1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_2
SAM_1
SAM_Ribosomal_mS41
ALIX_LYPXL_bnd
DUF4508
Motif
Other DBs
NCBI-GeneID:
87901623
NCBI-ProteinID:
XP_062728147
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All DBs
Position
7:1311659..1315022
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AA seq
609 aa
AA seq
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MLNMSNIMSNRNSTPEASNVSSLRPPSSRAVGANPHPLRASADISTLSNQAAAARIRPSS
DFYGQVQSGQGQGAAELDPQDKLTQQWIADIDQYENTLEEMAAATLDQDFKDELSAIEQW
FQVLSEAERTAALYALLQQTTQVQIRFFIQVLQQMGKNHPMSGVLSPANFDKDPMSNRLS
DAMSKLNVDSARNSMARASPAAKRQSGLDPSTINAMFPDAAAAIATEKAKFTQQTGQPPS
TRNSLVDNRNSLAAPTISAPAEDPNGQNPASPWGPNDANRPKSSSAGQPPMGQFVQPPPS
SGALRSPRPNITGNTNIQSTTLTTGDKGVGDLPLLSPYTASGNWASMVNTPMVPTFNQGG
NNADMVANATAMKLAALSTVNNRFALDDVRKYRRARSNEPDPGQNPLSPGLPSIPGAIMV
SQHGGGMALGRDGMLNLQQPQQGMGFVNHRSRPNSPGVPLQNSYVPAMAFASPQNNGFLS
AYDGSAGLMNNGLAPNFPPHIQVGFEGGGYHSDHSDMVRGRSPRGRRGTSKPPEDPTDPT
LLQDIPSWLRSLRLHKYTDNLKDMKWTDLIELDDKQLEERGVNALGARRKMLKVFEQVKE
AKNEGKLSS
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgctcaatatgtccaacattatgagcaaccgcaacagcacgcccgaggcgtccaacgtc
tcatcgctgcgccccccttcttcgagggccgttggcgcgaacccccaccctcttcgtgcc
tctgccgatatctctactctgagcaaccaggccgccgccgcccgcatccgcccctcgtcg
gacttttatggtcaggttcagagcggacagggccaaggtgctgctgagttggatccccag
gataagctcacccagcaatggattgccgatatcgaccagtatgagaacactctcgaggag
atggctgctgccaccttggaccaggacttcaaggatgagctcagcgccattgaacagtgg
ttccaggtcctgagcgaggctgagcgtactgcggctctctacgccctccttcagcaaacc
acccaggttcaaattcgcttctttatccaggtcttgcagcagatgggaaagaaccacccc
atgtcgggcgttctttcccccgccaactttgacaaagatcccatgtccaaccgcttgagc
gatgctatgagcaagctcaatgtagactcggctcgcaactcgatggcccgcgcgagcccc
gctgcgaagcgtcagtctggtctcgaccccagcacgatcaatgccatgtttcccgatgcc
gccgccgccattgcgactgaaaaggccaagttcactcagcagacgggacagcccccctcc
acccgcaacagccttgtggacaaccgaaattcgcttgcggcccccaccatctcggccccc
gccgaagaccccaacggacagaatcctgcttccccttggggtcccaacgatgcgaaccgg
cccaaatcgtcttctgctgggcagccgccgatgggccagttcgttcagccccctccctcg
agcggtgctcttcgttcacctcgccccaatatcactggaaacaccaacattcagtctacg
accttgacgaccggtgacaagggtgttggtgatttgcccctgctttctccttataccgcc
agcggcaactgggcgtctatggtcaacactccgatggtgcccaccttcaatcagggcggt
aacaacgccgatatggtggccaacgccacggccatgaagctggctgcgctttctaccgtg
aacaaccggttcgcgctggatgatgtgcgcaagtatcgtcgtgcccgatccaatgagccg
gatccgggccagaacccgctttctcctggtcttcccagcatccccggtgccatcatggtc
agccagcatggcggtggcatggctttgggccgggatggtatgttaaaccttcagcagccg
caacagggcatgggctttgtcaaccaccggtctcgtcccaactcgcccggcgttcccctg
cagaactcgtatgttccggccatggcttttgcctcgccgcagaacaatggattcttgagc
gcctatgatgggtcggccgggcttatgaacaatggactggctccaaacttcccaccccac
attcaggtcggatttgaaggcggcggttaccactctgatcactctgatatggtccgcggc
cgctctccgcgtggtcggagaggcacctcgaagccccctgaggatcccaccgaccccact
cttttgcaggacatcccgagctggctacggagccttcgtctgcacaagtacacggataac
ctcaaggacatgaaatggacagaccttattgaattggatgacaagcaactggaggagcgc
ggcgtcaatgcactgggtgctagacgcaagatgctcaaggtctttgagcaggtcaaggag
gccaaaaacgagggcaagttgtcgagctag
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