Podospora bellae-mahoneyi: QC761_710060
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Entry
QC761_710060 CDS
T09795
Symbol
cdc17
Name
(RefSeq) ATP-dependent DNA ligase Cdc17
KO
K10747
DNA ligase 1 [EC:
6.5.1.1
6.5.1.6
6.5.1.7
]
Organism
pbel
Podospora bellae-mahoneyi
Pathway
pbel03030
DNA replication
pbel03410
Base excision repair
pbel03420
Nucleotide excision repair
pbel03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pbel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QC761_710060 (cdc17)
03410 Base excision repair
QC761_710060 (cdc17)
03420 Nucleotide excision repair
QC761_710060 (cdc17)
03430 Mismatch repair
QC761_710060 (cdc17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbel03032
]
QC761_710060 (cdc17)
03400 DNA repair and recombination proteins [BR:
pbel03400
]
QC761_710060 (cdc17)
Enzymes [BR:
pbel01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
QC761_710060 (cdc17)
6.5.1.6 DNA ligase (ATP or NAD+)
QC761_710060 (cdc17)
6.5.1.7 DNA ligase (ATP, ADP or GTP)
QC761_710060 (cdc17)
DNA replication proteins [BR:
pbel03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
QC761_710060 (cdc17)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
QC761_710060 (cdc17)
DNA repair and recombination proteins [BR:
pbel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
QC761_710060 (cdc17)
NER (nucleotide excision repair)
Other NER factors
QC761_710060 (cdc17)
MMR (mismatch excision repair)
Other MMR factors
QC761_710060 (cdc17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
AT_hook
Motif
Other DBs
NCBI-GeneID:
87902035
NCBI-ProteinID:
XP_062728608
LinkDB
All DBs
Position
7:2808269..2811418
Genome browser
AA seq
958 aa
AA seq
DB search
MPPKGSRQATLGKFFTQANGAAIPEPKVAAQNKTQTKLSFSTKVGGEQSPKRRKKDEEEE
VRSDAEGGEEGVKPVEKKKRGRPAKAAIITTTEKKTRKKEVDEDGDESMEDAEPAQKKAR
KGGRRVVRDEEDGDESMEDAPAPVEDGRVSSPEGYQYEKGSEPRMLNATPKKRQGKKVRQ
DEKEWNLGVESPEGYDYKGGSPPKLFKGDRLVAVGGVKVGKEEAGKIEGEKAGKKAVEKE
EEEVVKEGEETASSASDVEMEEEEEEEKPEVAKKARQKVQATLKSADEHPFPDWKAGEPV
PYAALCTTFSLVELTTKRLEIMAHCALFLRQVLRLTPDDLLPVVLLMINKLAPDYAGIEL
GIGESLIMKAIGESTGRSLAIIKQDQKEIGDLGLVAVKSRSTQPTMFKPKPLTVRGVLKG
LMGIATTTGNGAQGRKVDGIKKLLSQADANGAKKVDITKDKGGPSEAKYLVRFLEGKLRL
GLAEKSVIVSLSQAVVAHEAAQKGVAPSAADFEKGEAILKTVYSELPSYDVIIPAMVEHG
IMNLRDHCKLRPGVPLKPMLANPTKAITEVLDRFENKLFTCEYKYDGERAQIHYVAKDTA
EELSQSAANASKEVGNGVAAIFSRNSEDLSKKYPDVLAKLSTWVKDDTKSFVLDCESVAW
DVDEKKVLPFQQLMTRKKKDVKIEEVKVKVCVFAFDLLYLNGEAVVNKSLRERRELLHKS
FTPVEGEFAFATSMNGQELDEIQTFLDESVKASCEGLMVKMLDGEESGYEPSKRSRNWLK
IKKDYLAGIGDSLDLVVLGAYFGKGKRTSVYGAFLLACYNPGTDTYETVCNIGTGFSEAV
LEELHAQLSKITIDRPKPFYAHSSGGQHQPDVWFEPKYVWEVKTADLTLSPRYKAGMKEG
VDPSGEKGISLRFPRFIKVRDDKKPDEATSSRQVAEMYRKQESVSKSKGPSVDDDFEY
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctaaggggagtaggcaggctacgctggggaaattcttcacccaggccaacggc
gctgcgattccggagccaaaggtggcggcgcaaaataaaacgcagacgaagttgagtttt
tcgaccaaggtggggggggagcagagccccaagaggaggaagaaggatgaagaggaggag
gtgagatctgatgctgaggggggagaggagggggttaagccggtggagaagaagaaacgg
ggccgacctgctaaggctgccatcatcactacgacggaaaagaagacgagaaagaaggag
gttgatgaggatggggatgagagcatggaggatgcggaacctgcgcagaaaaaagcgagg
aagggggggaggagggtggtgagggatgaggaggatggggatgagagtatggaggatgcg
ccggcgccggttgaggatggcagggtgtcctcgccggaggggtatcagtatgagaagggg
agtgagccgaggatgttgaatgcgacgccgaagaagaggcaggggaagaaggtgagacag
gatgagaaggagtggaatttgggggtggagtcgccggaggggtatgattataagggtggg
agtccgccgaagctttttaagggggataggttggttgctgttgggggggtgaaggttggg
aaggaggaggcggggaagatagagggggagaaggccgggaagaaggcggttgagaaggag
gaggaggaggttgtcaaggagggagaggagacggcgtcgtcggcttcggatgtggagatg
gaggaggaggaggaggaggagaagccggaggtggccaagaaggcgaggcagaaggtgcag
gctacgcttaagagtgctgatgagcatccttttcctgactggaaggctggggagccggtg
ccgtatgctgctctctgcactacgttttcgctggtggagctcacgacgaagaggctggag
attatggcgcactgtgcgctgtttttgagacaggttttgaggctcacgccggatgatctt
ttgccggtggtgctgctaatgatcaacaagcttgctcctgactatgcgggtatcgagctg
ggcatcggagagagtttgatcatgaaggctatcggagagtcgacggggagaagtctggcg
attatcaagcaggatcagaaggagattggtgatctgggcttggtggcggtcaagagcagg
tcgacgcagccgaccatgtttaaaccaaagccattgactgttaggggtgtgctgaagggg
ctgatgggcattgccacgacaacgggcaatggagctcaggggaggaaggtggatgggatc
aagaaactgctttcccaggctgatgccaacggggcgaagaaggttgatatcaccaaggac
aagggcgggccgagtgaagccaagtatctggtcaggttcctggaggggaagctgagattg
ggtctggcggagaagtcggtcattgtcagcttgtcacaggcggtggttgcgcacgaggcg
gctcaaaagggggttgcgcccagtgcggctgactttgagaagggcgaggcgatcctcaag
actgtctacagcgagctgccaagctacgatgtcatcattccggctatggttgagcacggg
atcatgaacctgagggatcactgcaagttgaggcctggtgttcccctcaagcccatgttg
gccaatcctaccaaggctatcaccgaggttctggaccggtttgagaacaagcttttcact
tgcgagtacaagtacgatggtgaaagagcgcagattcactatgtggccaaggacactgct
gaagagctcagccagtcggccgcgaatgccagcaaggaggtgggtaatggtgttgcggcg
atcttctcgagaaactcggaggatctgtccaagaagtaccctgacgtcttggccaagctg
tctacttgggtcaaggatgacacgaagagctttgtcttggactgcgagtcggttgcttgg
gatgtggatgagaagaaggtgttgcctttccagcagctgatgacgcgcaagaagaaggac
gtcaagattgaggaagtcaaggtcaaggtttgcgtctttgcgtttgatctgctttatcta
aacggggaggcggtggtgaacaagtcgctcagggagaggagggagctgttgcacaagtcg
tttactcctgtcgagggcgagtttgcgtttgcgacgtcgatgaatgggcaggagctggat
gagattcagacgttcttggatgagtcagtcaaggcttcgtgtgaggggttgatggtgaag
atgctggatggggaggagagcgggtatgagcctagtaagaggtcgaggaattggttgaag
atcaagaaagactacctcgccggcatcggcgactcgctcgacctcgtcgtcctcggcgcc
tactttggcaagggcaagcgcacctctgtctacggcgcctttttgctggcgtgctacaac
cccggcacggacacgtacgaaacggtctgcaacattggcaccggcttcagcgaggctgtg
ctcgaggagctgcatgcccagctctccaagatcacgattgatcgccccaagccgttttac
gcccacagcagcgggggccagcaccagccggacgtgtggtttgaacctaaatatgtctgg
gaggtcaagacggcggacttgacgctgagcccgaggtacaaggcggggatgaaggagggg
gttgacccgagcggggagaaagggatcagcttgaggtttccgaggtttatcaaggtgagg
gatgacaagaagccggacgaggcgacgagcagtcggcaggtggcggagatgtatcggaag
caggagagtgtgagtaagagcaaggggccgagtgtggatgatgattttgagtattag
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