Pseudomonas benzopyrenica: V6W80_00185
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Entry
V6W80_00185 CDS
T10550
Symbol
choX
Name
(GenBank) choline ABC transporter substrate-binding protein
KO
K02002
glycine betaine/proline transport system substrate-binding protein
Organism
pben Pseudomonas benzopyrenica
Pathway
pben02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pben00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
V6W80_00185 (choX)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pben02000
]
V6W80_00185 (choX)
Transporters [BR:
pben02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
V6W80_00185 (choX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
Motif
Other DBs
NCBI-ProteinID:
WWM66748
LinkDB
All DBs
Position
37121..38038
Genome browser
AA seq
305 aa
AA seq
DB search
MKHGIIATFTLALVSLSAQAEDQACGTVRLADPGWSDIAATNALTGAVLGALGYTSKVET
LAVPIIYGGMRNGQVDAFLGNWMPAQQAHYDQFVKTGQVTELAQNLVGTEFTLAVPTYVW
EGGVKSFADLAKHADQFGKKIYGIGAGAPANQSLQKIIQDNEFGLGSWQLVESSEQAMLS
QVGRAVKRDKWVVFLGWTPHPMNVDYPIKYLTGGDKYFGTAGTVNTLTRNGYAEQCPNPA
RLLTNMKFTLDMENAVMSAARDKGGSYDAAAKAWLKAHPQVLEPWLQGVTTRDGQPGLPA
VQQAL
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgaaacacggaatcatcgctacgttcacgctggccctggtcagcctgtcggcccaggcc
gaggatcaggcctgtggaacggttcgcctggccgatccgggctggagcgacatcgccgcc
accaacgccctcaccggcgcggtcctgggcgcgctgggctacaccagcaaggtcgagacc
ctggcagtgccgatcatctacggtggcatgcgcaacgggcaggtggacgccttcctcggc
aactggatgccggcgcagcaggcgcactatgaccagttcgtgaagaccggccaggtgacc
gagctggcgcagaacctggtcggtaccgaattcactctggcggtgcccacctatgtctgg
gagggcggggtgaagagcttcgccgatctggccaagcatgccgaccagttcggcaagaag
atctacggcatcggggccggtgcgccggccaaccagtcgttgcagaagatcatccaggac
aacgaattcggcctgggcagctggcagctggtggagtccagcgaacaggccatgctgtcc
caggtagggcgcgcggtgaagcgtgacaagtgggtggtctttctcggctggacgccgcat
cccatgaacgtcgactacccgatcaagtacctgaccgggggcgacaagtatttcggtacc
gccggcacggtgaacaccctgacgcgcaacggctacgccgagcagtgccccaatccggcc
cggttgctgaccaacatgaaattcaccctggacatggaaaacgccgtcatgagcgccgca
cgggacaagggcggcagctacgatgccgccgccaaggcctggctcaaggcccatccccag
gtgctggagccctggctgcagggcgtcaccacccgcgacggccaacccggcttgccagcg
gtacagcaagcgctctga
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