Pseudomonas benzopyrenica: V6W80_01395
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Entry
V6W80_01395 CDS
T10550
Name
(GenBank) DNA-binding transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
pben Pseudomonas benzopyrenica
Brite
KEGG Orthology (KO) [BR:
pben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pben03000
]
V6W80_01395
Transcription factors [BR:
pben03000
]
Prokaryotic type
Helix-turn-helix
LacI family
V6W80_01395
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PBP1_XylR
Peripla_BP_3
HTH_18
HTH_AraC
Peripla_BP_1
Peripla_BP_4
HTH_23
Motif
Other DBs
NCBI-ProteinID:
WWM66977
LinkDB
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Position
complement(294996..296249)
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AA seq
417 aa
AA seq
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MPSQPLVHRVALLFNGSKIYDRGILAGIGNYLSGTRARWDLFLEEDFLCRLKGIERWQGD
GIIADFDDPAVSAALAHSNLPVVAVGGSYATPGDYPPGIPYVATDNAALVRLAYDHLIES
GLTRFACFSLPAAETNRWAGEREAAFAALLRRDGLPVEIYRGLETSAPLWDTAVEQLIAW
LEALPKPVGILAVTDARARQLLQACLTAGIPVPEQVALVGIDNDPLARTLTRVPLTSVIQ
GTEAIGREAARLLHQRLHGVELGAPRVLIPPEGINIQASSRHQAVRHPQVMRALHFIRQY
ACQGIKTAQVASYVGISRSALEMSFRRELGRSVHDEILGFKLAAAAVALQEGAPSLAEVA
RRCGFTSAQYLHSVFRREFGCTPRQYQQRPVALKDAHEKARPETGFQEATVAYLPTV
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgcccagccagccgctcgtccaccgcgtcgccctgctgttcaacggcagcaagatctac
gatcgcggcatcctggccggcatcggcaactacctgagcggcacccgggcgcgctgggat
ctgtttctggaagaggatttcctctgccggctcaagggcatcgagcgctggcagggcgac
ggcatcatcgccgacttcgacgatccggcggtgagcgccgccctggcccatagcaacctg
ccagtggtggccgtcggcggttcctacgcgacccctggggactacccaccgggcattccc
tatgtggccaccgacaacgccgccctggtgcgcctggcctacgaccatctgatcgaatcc
gggctgacccgcttcgcctgcttcagcctgccggccgccgagaccaatcgctgggccggc
gagcgcgaggcggcctttgccgccctgctccgccgcgatggcctgccggtggagatctat
cgcggcctggagaccagcgcaccgctgtgggacacggccgtggaacagctgatcgcctgg
ctggaggccctgcccaagccggtgggcatcctggccgtcaccgacgcccgggcgcggcaa
ctcctgcaggcctgcctcaccgccggcatcccggtgccggaacaggtggcgctggtgggt
atcgacaatgatcccctggcccggaccctgacccgggtgcccctgacctcggtgatccag
ggcaccgaggccatcggccgcgaggcggcgcgactgctgcatcagcggctgcacggcgtc
gaactcggcgcaccacgggtgctgatcccgccggaggggatcaatattcaggcctccagt
cgccatcaggcagtgcgccatccccaggtgatgcgcgccctgcacttcattcgccaatac
gcctgccagggcatcaagaccgcccaggtggccagctacgtgggcatctcccggtcagcg
ctggaaatgtcctttcgccgcgagctgggccgcagcgtccatgacgaaattctcggcttc
aagctggccgcggccgcggtcgccctgcaggaaggggcgccgagcctggccgaggtcgcc
cggcgctgcggcttcacctcggcgcagtacctgcactcggtgtttcgccgcgaattcggc
tgtacgccgcgacagtatcagcagcgccccgtggcgctgaaagacgcccatgaaaaagcc
cgtccggagacgggctttcaggaagcgaccgtggcttatttgccgacggtctga
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