Pseudomonas benzopyrenica: V6W80_02000
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Entry
V6W80_02000 CDS
T10550
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pben Pseudomonas benzopyrenica
Pathway
pben03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pben00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
V6W80_02000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pben03019
]
V6W80_02000
Enzymes [BR:
pben01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
V6W80_02000
Messenger RNA biogenesis [BR:
pben03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
V6W80_02000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
WWM67093
LinkDB
All DBs
Position
complement(419889..421280)
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AA seq
463 aa
AA seq
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MLKKLIQTLRSPLRRTPPAPALPIELPRSQHALERERISRYALSVVDRLEKAGYQAYLVG
GCVRDLLLGFEPKDFDVATSATPEQVRAEFRNARVIGRRFKLVHVHFGREIIEVATFRAN
HPTGDAEDEAQGSRHESGRILRDNIYGNQEQDAQRRDFTINALYYDASGERILDYANGTQ
DIRLRQIRLIGDPEQRYLEDPVRMLRAVRFAAKLDFEIETATAEPISRLAPLLRDIPAPR
LYDEIIKLLLGGKAERTFELLCQYGLFAPLFPASGEALERDPEYAGSLIRQALANTDTRI
REGKPVTPAFLFAALLWPALPERVRYHQDRGLPPIPAMQEAAHDLTQQQCQRTAVPKRFT
MPMREIWDMQERLPRRQGKRADQLLENPRFRAGYDFLLLRESAGEETGGLGEWWTRYQEV
GDSQRREMIKNLSREDGAPAKRRRRGGSNRKRRTSDAPTSGDE
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagaagctgatccagactctgcgctcgcccctgcggcgtaccccgcccgcgcct
gccttgcccatcgaactgccccgcagtcagcatgctctggaacgagagcggatcagtcgt
tacgccttgagcgtggtcgaccggctggaaaaggcgggttatcaggcctacctggtgggc
ggttgcgtccgggacctgttgctgggtttcgagcccaaggacttcgatgtcgccaccagt
gccacgcccgagcaggtgcgggccgaattccgcaatgcgcgggtcatcggccggcgcttc
aagctggtccatgtgcatttcggccgtgagatcatcgaggtggcgaccttccgcgccaat
caccccaccggggatgccgaagacgaagcccagggctcgcgccatgaaagcggccggatc
ctgcgcgacaacatctatggcaaccaggaacaggatgctcagcggcgcgacttcaccatc
aacgcgctctactacgatgccagcggcgaacgcattctcgactatgccaatggcacccag
gacatccgcctgcggcagatccgtctgatcggcgatccggagcagcgctacctggaagat
ccggtgcggatgctgcgcgccgtgcgtttcgccgccaagctggatttcgagatcgagacc
gccaccgccgaacccatcagccgtctggcgccgttgctgcgcgacatacccgcgccgcgg
ctgtacgacgagatcatcaagctgctcctgggcggcaaggcggagcgcaccttcgagttg
ctctgccagtacggcctgttcgcccccttgttcccggccagtggcgaggccctggagcgc
gacccggaatacgccggcagcctgatccgccaggccctggccaacaccgacacccgcatc
cgcgaaggcaagccggtcaccccggccttcctgttcgccgccctgctctggccggccttg
cccgagcgcgtccgctatcaccaggatcgcggcctgccgcccattccggccatgcaggaa
gccgcccacgacctgacccagcagcagtgccagcgcaccgccgtccccaagcgtttcacc
atgcccatgcgcgagatctgggacatgcaagagcgcctgccgcgccgtcagggcaagcgc
gccgatcaactgctggaaaatccgcgcttccgcgccggctacgacttcctgctgctgcgc
gagagcgccggcgaggaaaccggtggcctgggcgagtggtggacgcgctaccaggaagtc
ggtgacagccagcgacgcgagatgatcaagaacctcagccgggaagacggcgcgccggcc
aagcggcggcgccgtggcggcagcaatcgcaagcggcgcacctcggatgcgcccacgtcc
ggcgacgaatga
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