Pseudomonas benzopyrenica: V6W80_02290
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Entry
V6W80_02290 CDS
T10550
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pben Pseudomonas benzopyrenica
Brite
KEGG Orthology (KO) [BR:
pben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pben03016
]
V6W80_02290 (truB)
Enzymes [BR:
pben01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
V6W80_02290 (truB)
Transfer RNA biogenesis [BR:
pben03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
V6W80_02290 (truB)
Prokaryotic type
V6W80_02290 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
TruB_C
PUA_3
Motif
Other DBs
NCBI-ProteinID:
WWM67140
LinkDB
All DBs
Position
484073..484987
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AA seq
304 aa
AA seq
DB search
MAQVKRIRRQVHGVLVLDKPRGFSSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDADKGYSTVAQLGVTTTTGDAEGEVLERRAVAVDEAAIQAALPAFRGQIE
QIPPMYSALKRDGQPLYKLARAGEVVEREARSVTIARLELLALQEDRATLEVACSKGTYV
RTLVEDLGARLGCGAHVAELRRTQAGPFGLAQAISLDELEAAHAEGGSEALDRFLLPVDS
GLEHWPLVQLTQHSAYYWLHGQPVRAANAPKFGLMRVQDDQGRFIGIGEIDDEGQVAPRR
LIRS
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
gtggcccaggtcaagcgtattcgccgccaggtacatggcgtgctggtgctggacaagccg
cgcggcttctcctccaacgccgccctgcaaaaggtccgctggctgctcaacgccgagaag
gctggacataccggcagcctggaccccctggccaccggcgtattgccgctgtgcttcggc
gaggcgaccaagttttcccagtacctgctggatgccgacaagggctatagcaccgtggcg
caactgggcgtcaccaccaccaccggcgatgccgagggtgaagtgctggagcgacgggcg
gtcgcagtcgatgaagcggccatccaggcggcactgccggccttccgcggccagatagag
cagatcccgccgatgtattcggcgctcaagcgcgacggccagccgctgtacaagctggcg
cgtgccggggaagtagtggagcgcgaggcgcgttctgttactattgcccgtctggaactg
ctggcgttgcaggaagatcgtgcgacgctggaagtggcctgcagcaagggcacttatgtg
cgcaccctggtcgaagacctcggcgcccgtcttggctgcggagcccatgtggccgagttg
cgccgtacccaggccggcccctttggcctggcacaggccatcagcctggacgagctggag
gcggcgcacgccgaagggggttccgaggcgctggatcgcttcctgctgccggtcgacagt
ggcctggagcactggccgctggtgcagctgacgcagcacagcgcctactactggttgcac
ggtcagcccgtccgggcggccaatgcaccgaaattcggcttgatgcgggtgcaggacgac
cagggtcgtttcatcggcatcggcgagattgatgacgaggggcaggttgctccccgtaga
ctgattcggtcctag
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