Pseudomonas benzopyrenica: V6W80_03245
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Entry
V6W80_03245 CDS
T10550
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pben Pseudomonas benzopyrenica
Brite
KEGG Orthology (KO) [BR:
pben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pben03021
]
V6W80_03245 (rpoH)
Transcription machinery [BR:
pben03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
V6W80_03245 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
ImpA_N
IF2_N
SANT_DAMP1_like
GntR
Motif
Other DBs
NCBI-ProteinID:
WWM67314
LinkDB
All DBs
Position
690000..690854
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AA seq
284 aa
AA seq
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MTTSLQPVPTLVPGASLEAYVHSVNSIPLLTPERERELAERLFYKEDVEAARQLVLAHLR
FVVHIAKSYSGYGLAQADLIQEGNVGLMKAVKRFNPEMGVRLVSFAVHWIKAEIHEFILR
NWRIVKVATTKAQRKLFFNLRSQKKRLAWLNNDEVHRVAETLGVEPREVREMESRLTGHD
MAFDPASDADDDAAYQSPAQYLEDSRYDPARQLEEADWTDSSTANLHEALERLDDRSRDI
LYQRWLAEEKATLHELAAKYNVSAERIRQLEKNAMNKLKGNIAA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaccacttcgttgcaacctgttcctacattggttcccggcgccagcctggaagcctat
gtgcattcggtgaacagcattccgctgctcactccggagcgggagcgtgaactggccgag
cgcctcttctacaaggaagacgttgaggccgcccggcagttggtgctcgcgcatctgcgt
ttcgtggtgcatatcgccaagagctattccggctatggtctggcccaggccgacctgatc
caggaaggtaacgtcggcctgatgaaggccgtgaagcgcttcaatcccgaaatgggcgta
cgtctggtgtcctttgccgtgcactggatcaaggcggaaatccacgaattcatcctgcgc
aactggcggatcgtcaaggtcgccaccacaaaggcgcagcgtaagctgttcttcaacctg
cgcagccagaagaagcggctggcctggctgaacaacgacgaggtccatcgcgtggccgaa
accctgggcgtcgagccccgggaagtgcgcgagatggaaagccgtctgaccggtcatgac
atggccttcgacccggccagcgatgccgatgacgatgcggcctatcagtcgccggcccag
tacctggaagacagccgttacgatccggcgcgtcagctggaagaagccgactggaccgac
agctccacggccaatctgcacgaggccctggaacgcctggacgaccgcagccgcgacatc
ctctaccagcgctggctggccgaggaaaaggcgacgctgcacgagctggcggccaagtac
aacgtctcggcggaacgtatccgtcagctggaaaagaacgcgatgaacaagctcaagggc
aacatcgccgcctga
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