KEGG   Pseudomonas benzopyrenica: V6W80_03560
Entry
V6W80_03560       CDS       T10550                                 
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
pben  Pseudomonas benzopyrenica
Pathway
pben00260  Glycine, serine and threonine metabolism
pben00460  Cyanoamino acid metabolism
pben00630  Glyoxylate and dicarboxylate metabolism
pben00670  One carbon pool by folate
pben00680  Methane metabolism
pben01100  Metabolic pathways
pben01110  Biosynthesis of secondary metabolites
pben01120  Microbial metabolism in diverse environments
pben01200  Carbon metabolism
pben01230  Biosynthesis of amino acids
pben01240  Biosynthesis of cofactors
pben04981  Folate transport and metabolism
Module
pben_M00975  Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:pben00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    V6W80_03560 (glyA)
  09102 Energy metabolism
   00680 Methane metabolism
    V6W80_03560 (glyA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    V6W80_03560 (glyA)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    V6W80_03560 (glyA)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    V6W80_03560 (glyA)
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    V6W80_03560 (glyA)
Enzymes [BR:pben01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     V6W80_03560 (glyA)
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Beta_elim_lyase Cys_Met_Meta_PP Aminotran_5 DegT_DnrJ_EryC1
Other DBs
NCBI-ProteinID: WWM67377
LinkDB
Position
complement(758685..759938)
AA seq 417 aa
MFSRETTLARFDADLYAAMQQEAQRQEDHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
HKRYYGGCEYVDVVEQLAIDRAKQLFGADYANVQPHSGSQANSAVYLALIEAGDTILGMS
LAHGGHLTHGATVSSSGKLYNAVQYGIDEQGLIDYAEVERLAQEHKPKVIVAGYSAYSQV
LDFARFRAIADAVGAYLFVDMAHFAGLVAAGVYPNPVPFADVVTSTTHKTLRGPRGGLIL
AKANEAIEKKLNSAVFPGAQGGPLMHVIAGKAVCFKEALQPEFKTYQQQVIKNAQAMASV
FIERGFDVVSGGTDNHLFLLSLIKQEITGKDADAALGRAFITVNKNSVPNDPRSPFVTSG
LRIGTPAVTTRGFQEAECRELAGWICDILGNMGDESVIDAVREKVKAVCARLPVYGK
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgttcagccgtgaaaccaccctcgcccgcttcgacgccgacctgtatgccgccatgcag
caggaagcccagcgtcaggaagatcacatcgagctgatcgcttcggaaaactacaccagc
ccggcggtcatggaagcccagggtagcgtgctgaccaacaagtacgccgaaggctatccc
cacaagcgctactatggcggttgcgaatacgtcgacgtggtcgagcaactggccatcgac
cgcgccaagcagctgttcggcgccgactacgccaacgtccagccgcactccggctcccag
gccaactcggcggtgtacctggcgctgatcgaagccggcgacaccattctcggcatgagc
ctggctcacggcggccacctgacccacggcgccaccgtgtcctcgtcaggcaagctgtac
aacgccgtccagtacggtatcgatgagcaaggcctgatcgactacgccgaggtcgagcgc
ctggcccaggagcacaaacccaaggtcatcgtcgccggctactctgcctactcccaggtg
ctggatttcgcccgcttccgcgccatcgccgatgccgtgggtgcctacctgttcgtcgac
atggcccacttcgccggcctggtcgccgccggtgtctaccccaatccggtgcccttcgcc
gacgtggttaccagcaccacccacaagaccctgcgcggcccgcgcggcggcctgatcctg
gccaaggccaacgaagccatcgagaagaagctcaactcggcggtcttccccggtgcccag
ggcggtccgctgatgcatgtcatcgccggcaaggcggtgtgcttcaaggaggccctgcag
cccgagttcaagacctatcagcagcaggtgatcaagaacgcccaggccatggccagcgtg
ttcatcgagcgcggcttcgacgtggtctccggcggcaccgacaaccacctgttcctgctc
agcctgatcaagcaggaaattaccggcaaggatgcggacgctgccctgggtcgcgccttc
atcaccgtgaacaagaactcggtgccgaacgatccgcgctcgcccttcgtcacctccggt
ctgcgcatcggcaccccggccgtcaccacccgtggcttccaggaagccgagtgccgcgag
ctggccggctggatctgcgacatcctcggcaacatgggcgacgagtcggtgatcgatgcc
gtgcgcgagaaggtcaaggccgtctgcgcccgcctgccggtgtacggcaagtaa

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