Pseudomonas benzopyrenica: V6W80_04490
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Entry
V6W80_04490 CDS
T10550
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pben Pseudomonas benzopyrenica
Pathway
pben03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pben00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
V6W80_04490 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pben03019
]
V6W80_04490 (rnc)
03009 Ribosome biogenesis [BR:
pben03009
]
V6W80_04490 (rnc)
03036 Chromosome and associated proteins [BR:
pben03036
]
V6W80_04490 (rnc)
Enzymes [BR:
pben01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
V6W80_04490 (rnc)
Messenger RNA biogenesis [BR:
pben03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
V6W80_04490 (rnc)
Ribosome biogenesis [BR:
pben03009
]
Eukaryotic type
90S particles
RNase
V6W80_04490 (rnc)
Prokaryotic type
rRNA processing factors
V6W80_04490 (rnc)
Chromosome and associated proteins [BR:
pben03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
V6W80_04490 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
WWM67554
UniProt:
A0ABZ2FUR9
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All DBs
Position
964529..965218
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AA seq
229 aa
AA seq
DB search
MTLSLDRLERRLGYTFKDPDLMLLALTHRSFAGRNNERLEFLGDAILNFIIGEALYDHFP
QAREGQLSRLRAKLVKGETLALLARSFELGDYLRLGSGELKSGGFRRESILADAMEALIG
GIYLDAGMDAAKDRVMAWLGPQLRELTPVDTNKDPKTRLQEFLQARACDLPRYEVVAIEG
EPHCRVFFVECEIAMLNEKTTGQGVSRRIAEQIAASAALIALGVENGHE
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
gtgactttatctctagatcgcctcgagcgtcggctgggttataccttcaaggacccggac
ctgatgctgctcgccctcacgcaccgcagctttgccggtcgcaacaacgaacgcctggaa
tttctcggcgacgccatcctcaacttcatcatcggcgaagccctctacgatcacttcccc
caggcccgcgaaggtcagctgtcccgcctgcgggccaagctggtgaagggcgagaccctg
gcgctgctggctcgcagtttcgaactgggtgattacctacgcctgggctccggtgaactc
aagagcggtggctttcgccgcgaatccatcctcgccgatgccatggaagctctgattggc
ggcatctatctggatgccggcatggacgccgccaaggatcgggtcatggcctggctcggg
ccgcaactacgcgagttgacgccggtggataccaacaaggatcccaagacccggctgcag
gagttcctccaggcacgcgcctgcgacctgccacgctacgaggtggtcgccatcgaagga
gagccccattgccgggtcttcttcgtcgaatgcgagatcgccatgctcaatgagaaaacg
acggggcagggcgtcagtcgccgcatcgccgaacagatagctgcctcggcggccttgatc
gccctgggcgtggagaatggtcatgaatga
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