Pseudomonas benzopyrenica: V6W80_04990
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Entry
V6W80_04990 CDS
T10550
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pben Pseudomonas benzopyrenica
Pathway
pben03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pben00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
V6W80_04990 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pben03400
]
V6W80_04990 (ung)
Enzymes [BR:
pben01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
V6W80_04990 (ung)
DNA repair and recombination proteins [BR:
pben03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
V6W80_04990 (ung)
Prokaryotic type
V6W80_04990 (ung)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WWM68978
UniProt:
A0ABZ2FXC8
LinkDB
All DBs
Position
1075149..1075844
Genome browser
AA seq
231 aa
AA seq
DB search
MVDDDRIKLDPQWKAALRDEFEQPYMRQLSEFLRREKAAGKVIYPPGPLIFNALNTTPLD
QVRVVILGQDPYHGPGQAHGLSFSVQPGVPAPPSLQNIFKELKRDLNLPIPNHGYLQHWA
EQGVLLLNTSLTVEQANAGSHAKAGWQRFTDRIIEVVSAERENLVFLLWGSHAQSKQTLI
DPQKHLILKSAHPSPLSAHRGFIGNGHFGRTNEFLRNAGLAPIDWALPPLS
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atcgtggacgacgatcgcatcaagctcgacccccaatggaaagccgcgctgcgcgacgaa
ttcgagcagccctacatgcgccagctgagcgaattcctccgacgcgagaaggcagcaggc
aaggtcatttatccgcccggtccgctgatcttcaatgctctcaataccacccctttggat
caggtccgggtggtcatcctcgggcaggatccctatcacgggccgggccaggcccacggc
ctgagcttttcggtgcagcctggtgtgccggcaccaccgtcgttgcagaacatcttcaag
gaactcaagcgcgacctgaacctgcccattcccaatcacggctatctgcagcactgggcc
gagcagggcgtcctgctgctcaacacctcgctgacggtggagcaggccaacgccggttcc
cacgccaaggccggctggcagcgcttcaccgaccgtatcatcgaggtggtcagcgccgag
cgcgagaatctggtgttcctgctctggggcagccatgcccagagcaagcagacgctcatc
gatccccagaagcacctgatcctcaagtcggcgcatccctcgccgctgtcggcccatcgt
ggcttcatcggcaacggccacttcggccgcaccaacgaattcctgcgcaacgccggcctc
gcccctatcgactgggcgctgccgccactgtcctag
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