Pseudomonas benzopyrenica: V6W80_06315
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Entry
V6W80_06315 CDS
T10550
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pben Pseudomonas benzopyrenica
Brite
KEGG Orthology (KO) [BR:
pben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pben03016
]
V6W80_06315 (truD)
Enzymes [BR:
pben01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
V6W80_06315 (truD)
Transfer RNA biogenesis [BR:
pben03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
V6W80_06315 (truD)
Prokaryotic type
V6W80_06315 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
WWM67893
LinkDB
All DBs
Position
1374972..1376030
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AA seq
352 aa
AA seq
DB search
MTEDQLLGPRAHGDPCGQAILKASAEDFQVDEVLDIPLSGDGEHLWLWVEKRGLNTEEAV
RRLARAAGVPQRAISYAGLKDRQALTRQWFSLHLPGKADPDLAAACDETLVILQQGRHRR
KLQRGAHAANGFRLRLTGLKADAAALEARLQAIAAEGVPNYFGPQRFGHEGGNLADAQAC
ARDQRLPEQRNRRSRTLSAARSWLFNQVLAGRVADGSWQRAQEGDLLAFTDSRSHFPATT
ADLEDPRLAALDLHPTGPLWGAGESPVQGPAAALEQAVAKAAGELPAWLAGAGLSHERRI
LRLPIGGLTWHYPAPDILQLEFVLPAGCFATAVVRELVTLGEAGQTEHPCDF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagaccagctgctcgggccgcgcgcccatggcgacccctgtggccaggcgatc
ctcaaggccagcgccgaggacttccaggtggacgaggtactggacatcccgctgagcggt
gatggcgagcacctctggctatgggtcgagaagcgtggcctcaacactgaggaggccgtg
cgccgcctcgcccgtgccgctggcgtgccccagcgggcgatcagctacgccggtctcaag
gatcgccaggcgctgacccgccagtggttcagtctgcacctgcccggcaaggccgatccg
gacctcgcggccgcctgcgacgagacgctggtgatcctccagcagggacggcaccgacgc
aagctgcaacgcggcgcccatgccgccaatggcttccgtctgcgcctgaccgggctcaag
gccgatgccgcggcgctggaggcgcggctgcaggccatcgccgccgagggcgtacccaac
tatttcggtccgcagcgtttcggccatgagggcggcaatctggccgacgctcaagcgtgc
gcccgcgaccagcgcctgcccgagcaacgcaaccggcgttcgcgaaccctgtccgccgcg
cgcagctggctgttcaatcaggtgctggccggtcgtgtcgccgatggctcgtggcagcgg
gcgcaggagggcgatctgctggccttcaccgacagccgcagccactttccagcgaccacc
gccgatctagaggatccgcgcctggcggcgctcgatctgcaccccaccggccccctgtgg
ggcgccggcgagtcgccggtgcaggggccggccgctgccctggaacaggcggtggcgaag
gccgccggagagctgcccgcctggctggccggtgccggcctctcgcatgaacggcgcatc
ctgcgcctccccatcggcggcctgacgtggcattatcccgctcctgacattctgcaactc
gaattcgtcctgccggccggctgtttcgccaccgcagtggttcgcgagctggtaacgctt
ggcgaggcagggcagacggaacatccatgcgacttctga
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