Pseudomonas benzopyrenica: V6W80_06605
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Entry
V6W80_06605 CDS
T10550
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
pben Pseudomonas benzopyrenica
Brite
KEGG Orthology (KO) [BR:
pben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pben03016
]
V6W80_06605 (trmA)
Enzymes [BR:
pben01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
V6W80_06605 (trmA)
Transfer RNA biogenesis [BR:
pben03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
V6W80_06605 (trmA)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_31
Cons_hypoth95
Methyltransf_11
Methyltransf_4
Methyltransf_15
Methyltransf_12
MTS
DREV
TRM5-TYW2_MTfase
RrnaAD
Ubie_methyltran
PrmA
Motif
Other DBs
NCBI-ProteinID:
WWM67948
UniProt:
A0ABZ2FSY6
LinkDB
All DBs
Position
complement(1442541..1443629)
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AA seq
362 aa
AA seq
DB search
MSQPSFAPADYQAQLDAKANRLRELLAPFQAPEPEVFASPLQHYRLRAEFRLWRENEERH
YAMFAPGDKHTPILIEDFPIASQRINDLMPRLKAGWQADVALSFKLFQVEFLTTLSGDAL
ITLAYHRPLDAAWQAAAERLAANLGISLIGRSRGQRLVIGRDHVLEELEVAGKTYRYLQP
EGGFTQPNGTVNGKMLAWAHTALGARDDDLLELYCGNGNFTLPLASRVRKVLATEVSKTS
VNAALHNLANNGVDNVTLVRLSAEELTQALNEVRPFRRLAGVELKSYDFGTVFVDPPRAG
MDPDTCELTRRFERILYISCNPETLAENIAQLQDTHRITRCALFDQFPWTHHMESGVLLE
RR
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaaccttccttcgctcccgccgactaccaggctcaactcgacgccaaggccaac
cgcctgcgcgaactgctggcgcccttccaggctcccgagccggaggtcttcgcctcgccg
ctgcagcactaccggctgcgcgccgaattccgcctgtggcgggagaacgaggaacgccac
tacgccatgttcgccccgggcgacaagcacacgccgatcctcatcgaagacttccccatc
gccagccagcgcatcaatgacctgatgccgcgcctcaaggccggctggcaggcggacgta
gcgctgtcgttcaagctgttccaggtggaattcctcaccaccctgagcggcgatgcgctg
atcaccctggcttaccaccggccattggacgccgcctggcaagccgccgccgagcgcctg
gccgccaacctcggcatcagcctgatcggtcgttcccgcggccagcgcctggtgatcggt
cgcgaccatgtgctcgaagaactggaggtggccgggaaaacctaccgctatctgcaaccc
gagggcggcttcacccagcccaatggcacggtcaacggcaagatgctcgcctgggcccat
accgccctgggcgcgcgtgacgacgatctgctggagctctattgcggcaacggcaatttc
accctgccgctggccagtcgggtgcgtaaggtgctggccaccgaggtgagcaagacctcg
gtcaacgccgccctgcacaacctggccaacaatggcgtggacaacgtcaccctggtgcgc
ctctccgccgaggaactgacccaggcgctcaacgaggtccggcccttccgccgcctggcc
ggcgtggagctcaagagctacgacttcggcaccgtcttcgtcgacccgccccgcgccggc
atggacccggacacctgcgaactgacccgccgcttcgaacgcatcctctatatctcctgt
aacccggagaccctggccgagaacatcgcccagctgcaggacacccatcgcatcacccgc
tgcgccctgttcgaccagttcccctggacgcaccacatggagagtggggtgttgctggag
cggcggtga
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