Pseudomonas benzopyrenica: V6W80_08685
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Entry
V6W80_08685 CDS
T10550
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pben Pseudomonas benzopyrenica
Pathway
pben00061
Fatty acid biosynthesis
pben00071
Fatty acid degradation
pben01100
Metabolic pathways
pben01212
Fatty acid metabolism
pben02024
Quorum sensing
pben04146
Peroxisome
Module
pben_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pben00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
V6W80_08685
00071 Fatty acid degradation
V6W80_08685
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
V6W80_08685
09145 Cellular community - prokaryotes
02024 Quorum sensing
V6W80_08685
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pben01004
]
V6W80_08685
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pben04147
]
V6W80_08685
Enzymes [BR:
pben01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
V6W80_08685
Lipid biosynthesis proteins [BR:
pben01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
V6W80_08685
Exosome [BR:
pben04147
]
Exosomal proteins
Exosomal proteins of breast milk
V6W80_08685
Exosomal proteins of breast cancer cells
V6W80_08685
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
WWM68336
LinkDB
All DBs
Position
1866087..1867766
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AA seq
559 aa
AA seq
DB search
MMPNFWSDKYPEGIQTDIDLDRYRNVLAVFREACQTYAERPAFSNLGRTLSYRELYELSG
QFAAYLQKHTDLQPGDRIAVQMPNVLQYPVVVFGAMRAGLVVVNTNPLYTAREMQHQFKD
SGARALVCLANMAHLAEQVLPQTDIRHVIITEVGDLLPTFKRLLVNAVVRHVKKMVPAYR
IPHSIRFVDAMTKGEHVDFVDADPAAEDVAVLQYTGGTTGIAKGAMLTHRNLVANMLQCQ
VLMTKYLGGGAQVMIAPLPLYHIYAFTIHCMAMLIQGNHNVLITNPRDLPALVKELRQWR
FNGFVGLNTLFAALCNSEEFRQLDFSQLKVTFSGGMALQQSVALRWEEVTGCGICEGYGM
TETSPVVSFNPLERRRLGTIGVPVPGTDCKVVDADGVALGFDTPGELCVKGPQVMKGYWL
RPEATAEVLDAEGWLRTGDIAVIEPDGYLRIVDRKKDMILVSGFNVYPNELEEVLSQLPG
VLQCAAIGIPDEVAGEKIKVFVVPKPGASLTTEQVLKHMHDNVTGYKRPKLVEFRDSLPT
TNVGKILRRELRDAELKKA
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgatgccgaatttctggagtgacaaatatcccgagggcatccagacagacatagacctg
gaccgttatcgcaacgtcctggcggtattccgcgaggcctgccagacctacgccgagcgc
ccggcgttcagcaatctcgggcggacgctgagctaccgcgaactctatgagctgtccggt
cagttcgctgcctacctgcagaagcacaccgacctgcaacccggcgatcgcatcgccgtg
cagatgcccaatgtgctgcagtacccggtggtggtgtttggcgccatgcgcgccggcctg
gtggtggtcaacaccaacccgctgtacaccgcccgtgagatgcagcaccagttcaaggat
tccggcgcccgggcgctggtgtgcctggccaacatggcgcacctggccgaacaggtgctg
ccgcagaccgacatccggcacgtcatcatcaccgaggtcggcgacctgctgccgaccttc
aagcgcctgctggtgaacgccgtggtccgccacgtcaagaagatggtgccggcctatcgc
attccccattccatccgcttcgtcgatgccatgaccaagggcgagcacgtcgatttcgtc
gacgccgacccggcggcggaggatgtcgccgtgctgcagtacaccggcggcaccaccggc
atcgccaagggcgccatgctgacccaccgcaatctcgtggccaacatgctgcagtgccag
gtgctgatgaccaagtacctgggcggcggcgctcaggtcatgatcgcgccgctgccgctc
taccacatctatgccttcaccattcactgcatggccatgctgatccagggtaaccacaac
gtcctgatcaccaatccccgcgacctgcccgcgctggtcaaggaactcaggcagtggcgc
ttcaacggcttcgttggtctcaacaccctgttcgccgccctgtgcaacagcgaggagttc
cgccagctggatttctcccagctcaaggtgaccttctccggtggcatggcgctgcagcag
tccgtggccctgcgctgggaagaggtgaccggctgcggcatctgcgaaggctacggcatg
accgagaccagtcccgtggtgagcttcaatccactggagcgtcgccggctgggaaccatt
ggcgtaccggtaccaggtaccgactgcaaggtggtggatgccgatggcgtggccctgggc
ttcgacacccccggtgaactgtgcgtcaaggggcctcaggtgatgaagggctactggctg
cgccccgaggccaccgccgaagtcctggacgccgaaggctggctgcgcaccggcgatatc
gccgtcatcgaacccgatggctatctgcgcatcgtcgatcgcaagaaggacatgatcctg
gtgtccggtttcaacgtctatcccaacgaactggaagaggtgctctcccagttacccggg
gtgctgcagtgcgcggccatcggcatccccgacgaggtggcaggggagaagatcaaggtg
ttcgtggtgcccaagccgggtgcatccctgaccaccgagcaggtgctcaagcacatgcac
gacaacgtcaccggctataagcgacccaagctggtggaattccgcgacagcctgccaacc
accaacgttggcaagatactgcgccgcgaactgcgtgacgccgaactcaagaaggcgtaa
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