Pseudomonas benzopyrenica: V6W80_09235
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Entry
V6W80_09235 CDS
T10550
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pben Pseudomonas benzopyrenica
Pathway
pben02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pben00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
V6W80_09235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pben03021
]
V6W80_09235
Transcription machinery [BR:
pben03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
V6W80_09235
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
PhyR_sigma-like
HTH_23
Sigma70_ECF
HTH_11
HTH_28
GerE
Motif
Other DBs
NCBI-ProteinID:
WWM68433
UniProt:
A0ABZ2FXJ4
LinkDB
All DBs
Position
1978791..1979300
Genome browser
AA seq
169 aa
AA seq
DB search
MQTLESDRHGHIRTLYLDHHGWLRERLQRRLGCLGQAADLAQDTFVRLLAREGELERLRE
PRAFLATIAQGLLANHWRRQALERAYLEALAARPQAVQPSPEAQALILETITELDALLDR
LPGRVRQAFLLAQLEGLTYAVIAGRLGVSERMVKKYMAQAMLHCLELVS
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgcagacgctcgagtccgaccggcacggacatatccggaccctctacctggaccaccac
ggctggctgcgcgagcggctgcagcggcggctgggttgcctggggcaggcggccgacctg
gcccaggacaccttcgtccggctgttggcccgggaaggagagctggaacggctgcgtgaa
ccccgtgccttccttgcgaccatcgcccagggattgctggccaaccactggcggcgccag
gccctggagcgcgcctatctcgaagcgctcgccgcgcgaccgcaagccgtacagccttcg
ccggaagcccaggcgctcatcctggaaactatcaccgaactcgatgcgctgctcgaccgc
ctgcctggccgggtgcgccaggcctttctgctggcacagctggaagggctcacctatgcc
gtcatcgcagggcgtctgggcgtgtcggagcggatggtgaagaagtacatggcccaggcc
atgctgcattgcctggaactggtgtcttga
DBGET
integrated database retrieval system
