Pseudomonas benzopyrenica: V6W80_10105
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Entry
V6W80_10105 CDS
T10550
Name
(GenBank) phage tail length tape measure family protein
Organism
pben Pseudomonas benzopyrenica
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TMP_2
Tape_meas_lam_C
DUF4214
GvpG
PP1c_bdg
Motif
Other DBs
NCBI-ProteinID:
WWM68596
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All DBs
Position
2147009..2152483
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AA seq
1824 aa
AA seq
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MSGPSIAQLGIRVNSEEADQASDALDKLVQSGARTAQEMAALNLKQREAAKSAGDTARAM
GEVAQSANRANAELAALNLKQQYAAQVLGDLAKSSGLTVTELRELNAQQRQTAQLLQNLG
TVVGQSTAEIRAMTFSLQAVAAQNQAVATTAPKTTRAIKEQGDQVARLLGQIDPTVAALD
RLDAQQRKLQSFKKSGLIDADTFDQYNSRLEQTRAGLGSFDTQLDRTGMSAKATAAAMRG
VPAQLTDIVVSLQAGQAPLTVLLQQGGQLKDMFGGVGPAAKALGGYVLGLVNPFTLAAAA
VAVLGVAYYQGSEEATRYSKAIILTGNAAGISTDQMADMAASISRTTGTTGQASEALVLL
AESAKIPASQFEIIGRAAVAFSSATGRAIEDVIGEFVRLADEPSKAAATLNEKYRFLTLA
VYEQIKALEEQGNKQEAARVAEEAYAKALTERSAEIKRNLGGIESAWASLGNMAKTAWDS
MLNIGRPDTMQDKINNLKKQIAELESVTSSTGGLQASREDAKRKVQIEQLRAQLVLAEQQ
RDTEDAIAKARGVAADNQAKAIKASDDWSKREEANRSKEQRFADEEKKIRQDALLLGKSE
LEITNQVAAARAKIFGDARKAKAIALDTASVNQLQNNLKLIVGEYDSAEKKIEALGRAGL
ISQADVYQQRVTLLDQERGKVTEAYGAQIAAIEQLQGRANLSAQQRIQLTNQLNDAETAR
TKALADLDTKRATLQTEEEGRLRKLTLASNAYTASLQAQVEALRLQGERAAAAVGMGKDQ
AALFEQLNRLNDRYIEDLKALNRQRDEGSISAETYAKREQELRENQIALAKQVQDNYAQL
QVAQADWANGARGAWQDYLSNARDVAGQTRSAFTDALKGMEDYLLSFITGTKASFKDLVK
SIIADFARIELRKLISSAGGSGGSGGGIVGSISDLFGSFTTGGGSSGGGLNLASLYNYGS
SAYNFITGTGANLWNAYSTGGFTGLYNYGASAVGNLLGNGAATVGANTIGATAGSTGYAL
GQNLVQGGVSGASYAGTGAAAGSTAANAGLSAIGAVGYGIGGAISGYQQAGVKGAVTGAG
GAVAGAYAGAAIGSVIPIIGTAIGAAIGAFLGGTVGGSLWGGDWQTKDTGLMLGVSGGEL
DAQQYEYQKKKGGLFGKNKKRTRYSDLEEDNQNALDATYYAGLLGIENVYKQFGIDLTES
AIDGLTVATTTFSTKDKTSEEVQGLINDWFNKTFDSITDQLNVATGSQFREGLTFSGLTS
LLNNLVAVNTGLEQINVTTLKLSPASAYAADALRQFAGGMEQFGANVNTYYQGFFSQTER
EDDALGALRKQFEAFNLVLPDTREQYRKLVESMDVTYDAGQKTLSFLLGQAGSAASAYDV
LERRAKEAADAQQALADAQAEAAKSAADAAAKQLEAARQARISYADAMQQAYTADVQRAM
SAITNAIKAEQDALTESYKAQADALSARISASSDAVSSLTSMTGGLSRALRDLLGQSDAA
TAMLYQQGRATLESAAAIAKAGGSLANFEGLDQALDAVTGNSADRYSNWEDFARDQGRAA
NLIDELNKAAGGQLSVEQRTLETLKAQLDQGKSTYDAQMKAFQGQIDLAQQQLDTLNGIN
GSVISVKDALAQFATALGAAYAGQKSQNEAGSTASLDSQISRIYSQLLGRNADAGGLDFW
KQKVTSGALSAGDLQKAIAAGARDYISVYGIDAYRQQYGDNAAEAALKIPAFADGGLYSP
GAALVGERGPEIINFTKPGYVHTAAETSRILGGSGSAEVVRELQALRQENRDMRMALSEI
AKHTRGTRDELRQQNDTGVKLETA
NT seq
5475 nt
NT seq
+upstream
nt +downstream
nt
atgagcggaccgtccattgcacaactcggcatccgcgtaaattccgaggaggccgatcag
gcctctgatgcgctcgacaagctggtccagtctggcgcccgcaccgcccaggagatggcg
gcgctcaatctgaagcagcgcgaagccgcgaagtcggctggcgataccgctcgggcgatg
ggtgaggtggcgcaatccgccaaccgtgccaacgccgaattggccgcgctgaacctcaaa
cagcagtacgccgcccaggtcctgggcgacctggccaaatcgtctggcctgaccgtcacc
gagctgcgggagctgaatgcccagcagcgccagaccgcgcagctgctgcagaacctgggc
accgtggtgggccagtccacggccgaaatccgcgccatgaccttctctctgcaggcagtt
gccgcgcagaaccaggcagtggccaccaccgcacccaagaccacgcgcgccatcaaggag
cagggcgaccaagtcgcacgtctgctcggccagatcgaccctactgtcgcggccctggac
cgcctggatgcccagcagcgcaagctccagagcttcaagaagtcgggcctcatcgatgcc
gacacctttgaccaatacaacagccgcctggagcagacccgcgctggcctgggcagcttc
gacacccagctcgaccgcaccggcatgtctgccaaggcgaccgccgcggcgatgcgtgga
gtgcctgcccagctgaccgacatcgtcgtcagcctccaggccggccaggcccccctgacc
gtactgctgcagcagggcggccagctgaaggacatgttcggtggcgtagggccggctgcg
aaggctctgggcggctacgtcctcggcctggtgaacccgttcaccctcgcggccgctgct
gtggcggtccttggcgtggcctattaccagggcagcgaagaggcaacgcgctacagcaag
gcgatcatcctgaccggcaatgccgctgggatctctacggaccagatggccgacatggcg
gcgtcgatctcgcgcaccaccggtaccactggacaagcctccgaggcattggtcttgctg
gccgagagcgccaagatccccgcctctcagttcgaaatcatcgggagggctgcagtcgcc
ttctccagcgccactggaagggcaatcgaagatgtgatcggtgagttcgtccgtcttgcg
gatgagccatcgaaggctgcggccacgctcaatgagaaataccgcttcctcaccctggct
gtgtacgagcagatcaaggcgctggaggagcagggcaacaagcaagaagctgctcgggtc
gccgaggaagcctatgcgaaagccctgacagagcgctcggccgagataaaacggaacctc
gggggcattgaaagcgcctgggcttcgctcggcaacatggccaaaaccgcatgggattcc
atgctcaacatcggccgtcctgacaccatgcaggacaagatcaacaatctgaaaaagcag
attgctgaactggagagcgtcaccagtagcacgggcggactgcaggcgtcccgagaggat
gcaaagcgcaaggttcagattgagcagttgcgcgctcagctggttctggctgagcaacaa
agggacaccgaggatgccatcgcgaaggcccgcggagttgctgcggacaatcaggcgaag
gccatcaaggcctcggacgattggtcaaagcgggaggaggcgaaccgctccaaagagcaa
agattcgctgatgaagagaagaagatccgccaggacgcgctgctgctaggcaaatccgag
ctcgagatcaccaatcaggtagcagccgcaagggcgaagatattcggcgatgccaggaag
gcgaaggcaatcgcccttgataccgcttccgtcaaccagctgcagaacaacctcaagctg
atcgtcggcgaatacgactcggccgagaagaagatcgaggccctgggtcgtgccgggctg
atcagccaagccgatgtctatcagcagcgcgtcacgctgctggaccaggagcgcggcaag
gtcaccgaggcctatggcgcccagatcgctgcgattgaacagctgcagggtcgtgccaac
ctgtcggcccagcagcgcatccagctgaccaaccagctcaacgatgcggaaaccgcgcga
accaaggctctcgccgatctcgacaccaagcgcgccacgttgcagaccgaggaggagggc
aggctccgcaagctgactctggcatcgaacgcctataccgcttcgctgcaggcccaggtg
gaagcgctgcgcctgcaaggtgaacgggcagctgcagcagtcggcatgggtaaagatcag
gccgctctgttcgagcagctcaatcgcctgaacgatcgctatatcgaggacctcaaggca
ctgaaccgccagcgggacgagggttcgatcagcgccgagacctatgccaagcgcgagcag
gagctgcgcgagaaccagatcgcccttgccaagcaggtccaggacaactacgcccagctg
caggtggcccaagccgactgggcgaacggtgcccgtggagcctggcaggactacctgagc
aacgcccgagacgtcgccggccagacccgcagcgccttcaccgatgcgctgaagggcatg
gaggactacctcctctcgttcatcaccgggaccaaggcatcgttcaaggacctggtgaaa
tcgatcatcgcggacttcgcgcggatcgagctgcgcaagctgatcagcagcgcgggcggg
tcgggtggaagcggcggcggtatcgtcggcagcatcagcgatctgttcggaagcttcacc
actggcggcggctcttcgggcggcggcctgaatctggccagcctctacaactacggatcc
agcgcctacaacttcatcaccggcactggcgcgaacctgtggaacgcctacagcaccggt
gggttcaccggtctctacaactacggtgcgtctgctgttggcaatctgcttgggaatggc
gccgccacggttggcgccaacaccattggggccactgccggcagtactggctacgcactc
ggccagaacctggtccagggcggtgtcagcggcgcgagctatgcgggcaccggggcagct
gcgggtagcaccgcggcgaatgccggcttgtccgccatcggcgccgtgggctatggcatt
ggcggtgccatctcgggctatcagcaggcgggcgtcaagggcgcggtgaccggtgcgggt
ggtgccgtggccggcgcctacgcaggtgctgccatcggctcggtgatcccgatcatcggc
actgccatcggggccgccatcggcgcgttcctcggcggcaccgtgggtgggtcgctctgg
ggcggggactggcagaccaaggacaccggcttgatgctgggcgtctctggcggcgagctc
gacgcccagcagtacgaataccagaagaaaaagggcggcctgttcggcaagaacaagaag
cgcacccgctacagcgacctggaggaagacaaccagaacgcgctggatgccacgtactac
gccggtctgctgggcatcgagaacgtctataagcagttcgggatcgatctgaccgaaagc
gccatcgacggcctgacggtagccaccacgactttcagcaccaaggacaaaacctcggaa
gaggtccaggggctgatcaacgactggttcaataagacgttcgacagcatcaccgaccag
ctcaacgtggccaccggcagccagttccgcgaggggctgaccttcagcgggctgacgtcg
ctgctgaataacctggtggcggtgaataccgggctggagcagatcaacgtcacgacgttg
aaactgagcccggctagcgcctatgccgccgatgccctgcgccagttcgctggtggcatg
gagcagttcggcgccaatgtgaacacctactaccagggttttttctcgcagaccgagcgt
gaggacgatgccctgggtgcgctgcgcaagcagttcgaggcgttcaatctggtgctgccg
gatacgcgcgagcaataccgcaagctcgtcgagtctatggatgtgacttacgacgccggc
cagaagacgctcagttttctgctgggccaggcgggatccgctgcctcggcctacgacgtg
ctcgagcgccgcgccaaggaggccgcggatgcccagcaggccctggctgacgcccaggca
gaagcggccaagtccgcagccgatgctgctgccaagcagctggaagcggctcgccaggcg
cggatcagctacgccgatgcgatgcagcaggcctacaccgccgacgtgcagcgggcgatg
tcggcaatcaccaacgccattaaggccgagcaggatgcgctgaccgagagctacaaggct
caagccgacgcgctgagcgcccggatctcggcgtcgagtgatgccgtcagcagcctgacc
tctatgaccggcgggctcagcagggctctgcgggatctcttgggtcagagcgacgcggcg
acggccatgctgtaccagcagggccgggcgacgctggagtcggctgcagccatcgcgaaa
gcgggtggctcgctggccaacttcgagggtctggaccaggcgctggacgcggtcaccggc
aactctgccgatcgttacagcaactgggaagacttcgcccgggaccagggccgggccgcc
aatctcatcgatgagctgaacaaggccgccggcgggcaactgtcggtggagcagcgcacc
cttgagacgctgaaggcccagttggaccagggcaagtcgacctacgacgcgcagatgaag
gccttccagggccagatcgacctggcgcagcagcagctcgacacgctcaatgggatcaat
ggcagcgtgatcagcgtcaaggacgcgctggcacagttcgccaccgctctgggcgccgcc
tatgccggccagaagagccagaacgaggcaggcagcaccgcctccctggatagccagatc
agccggatctacagccagctgctcggccgcaatgccgacgccggtggcctggacttctgg
aaacagaaggtcaccagcggcgcgctatcggccggcgacctgcagaaggccatcgccgcc
ggcgcccgcgactacatctcggtctatggcatcgacgcctatcgccaacagtacggcgac
aatgcggccgaggcggcgctgaagattccggcctttgccgatggcgggctgtattcgcct
ggggctgctctggtcggcgagcgcgggccggaaatcatcaacttcacaaagccaggttac
gtccataccgcagcggagacctcacgcatcctcggcggctctggtagcgctgaagtggtt
cgcgagctccaggccctgcgccaggagaatcgggatatgcgtatggcgctcagtgagatc
gccaagcacacccgcggtacccgcgatgagctgcggcagcagaacgacaccggcgtcaaa
ctggagacagcatga
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integrated database retrieval system
