Pseudomonas benzopyrenica: V6W80_11470
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Entry
V6W80_11470 CDS
T10550
Name
(GenBank) efflux RND transporter permease subunit
KO
K07788
multidrug efflux pump
Organism
pben Pseudomonas benzopyrenica
Pathway
pben02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pben00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
V6W80_11470
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pben02000
]
V6W80_11470
Transporters [BR:
pben02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
V6W80_11470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
WWM68855
LinkDB
All DBs
Position
complement(2432514..2435645)
Genome browser
AA seq
1043 aa
AA seq
DB search
MDISRPFILRPVATTLLMVALLIAGLLAYRLLPVAALPQVDYPTIRVLTLYPGASPDVMT
SAVTAPLERQFGQMPGLSQMASTSSGGASVITLRFNLELNLSVAEQEVQAAINAANNLLP
SDLPAPPVYNKVNPADTPIVTLAISSRTLPLPTLYDLVDTRMAQKLAQVSGVGMVSLAGG
QRPAVRIQVDPDKLAAHNLTLADVRSLVTSENTNQPKGSFDGPTRVATLDANDQLRDPKA
YGDLILNYADNGALRLGDVATIAQGAENDRLSAWANRSGAILVNVQRQPGANVIQTVDRI
QALLPSLKESLPAGLDIAVLSDRTETIRAAVTDVQHEMLLAVGLVVMVTFVFLRRFSATL
IPSVTVPLSLIGTFGAMYLAGFSLNNLSLMALTIATGFVVDDAIVMLENISRHLEEGATP
MEAALKGARQIGFTLVSLTVSLIAVLIPLLFMQDVVGRLFREFAITLAVAILISLVISLT
LTPMMCARLLKREEAAEHQLVWLERLIAGYGRALRWSLANRALMLLLALATFVLTAVLYL
LVPKGFFPAQDTGSIQGITEAPQSISFRGMSERQQALAAVVLQDPAVASLSSYIGVDGDN
VTLNSGRMQINLKPQSERDVTAQEVIDRLRPAVAKVVGITLYMQPVQDLSVEDRVSRTQY
QLTLDSPDATLLDTWVPRLTEALHQRPELTDVTSDLQNKGLQLYLTIDRDAAARLGVQVS
AITDALYDALGQRQISTIYTQANQYRVVLASAAADSLGPDALSQVWVKAGSGTSSSGSSG
TGTANTTETTTDTSRAPVRLSSLVKMEQRPTRLVINHLSQFPAVTLSFNLANGISLGAAV
AAIDAAKQEIGLPVGINTHYQGAAAAFQASLSSTLLLILAAVVVMYIVLGVLYESFIHPL
TILSTLPSAAIGALLALLLTGNDLGLIAVIGIILLIGIVKKNAIMMIDFALDAERHQGLT
PEEAIYQAALLRFRPILMTTLAALFGAVPLMLATGAGAELRQPLGLVMVGGLLVSQVLTL
FTTPVIYLAFDRLGERLGRRRTA
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggatatctcgcgccccttcatcctgcgcccggtcgccaccaccctgttgatggtggcg
ctgctcatcgccggcctgctggcctatcggttgctgccggtcgcggcgctgccacaggtg
gactatcccaccatccgggtgctcaccctctatcccggcgccagccccgatgtcatgacc
agcgccgtcactgcgccgctggagcgtcagttcgggcagatgccgggcctgtcgcagatg
gcctccaccagctctggtggcgcctcggtcatcaccttgagattcaacctggaactgaac
ctgtcggttgccgaacaggaggtccaggcggcgatcaacgcagccaacaacctgctgccc
agcgacctgccggcgcccccggtgtacaacaaggtcaatccggccgatacgcccatcgtc
accctggcgatcagctccaggaccctgccgctgcccacgctctacgacctggtcgacacc
cgcatggcgcagaagctggcccaggtcagcggggtagggatggtcagcctggccggcggc
cagcgcccggcggtgcgcatccaggtcgatcccgacaagctcgcggcccacaacctgacc
ctggccgatgtgcgcagcctggtcaccagcgaaaacaccaaccagcccaagggcagcttc
gacggacccactcgggtggccaccctggacgccaacgaccagttgcgcgaccccaaggcc
tatggcgacctgatcctcaactacgccgacaacggcgccctgcgcctgggtgacgtcgcc
accatcgcccagggcgcggaaaacgaccgcctgtccgcctgggccaatcgcagcggcgcc
atcctggtcaacgtccagcgccagcccggggccaacgtcatccagaccgtcgaccgcatc
caggcgctgttgccgagcctcaaggaaagcctgccggccggtctcgacatcgccgtgctc
agcgaccgtaccgagaccatccgcgccgcggtcaccgacgtccagcacgagatgctgctg
gcggtgggattggtggtcatggtcaccttcgtcttcctgcgccgcttcagcgccaccctg
atcccctcggtcacggtgccgttgtcgttgatcggcacctttggcgccatgtacctggcc
ggcttctcgctgaacaacctgtcgctgatggccctgaccatcgccaccggcttcgtcgtc
gacgacgccatcgtcatgctggaaaacatctcccgacatctggaagagggcgccacaccc
atggaggcggcgctcaagggcgcccgtcagatcggtttcaccctggtgtccctaaccgtt
tcgctgatcgccgttcttatcccgctgctgttcatgcaggacgtggtcggccggctgttc
cgcgaattcgccatcaccctagcggtggccattcttatctccctggtgatctcccttacc
ctcacgccgatgatgtgcgcccgcctgctcaagcgcgaggaagccgccgagcaccagctg
gtctggctggagcggctgatcgccggctacggccgggcgctgcgctggtcgctggccaat
cgggcgctgatgctgctgctggcgctggcgaccttcgtgcttaccgcggtgctctacctg
ctggtgcccaagggcttcttcccagcccaggacaccggctccatccagggcatcaccgag
gcgccccagtcgatttccttccgtggcatgagcgagcgccaacaggccctggccgcggtg
gtgctgcaagacccggcggtggcgagcctgtcgtcctatatcggcgtcgatggcgataac
gtcaccctcaacagcggtcgcatgcagatcaacctcaagccgcagagcgagcgcgacgtc
acggcccaggaggtgatcgaccggctgcggcccgcggtcgccaaggtggtgggcatcacc
ctctacatgcagccggtgcaggacctcagcgtggaagaccgggtcagccgcacccagtat
cagctcaccctggattcacccgacgccactctgctcgacacctgggtgccgcggctgacc
gaggcgctgcaccagcggcccgagctcaccgatgtcaccagcgacctgcagaacaagggg
ctgcagctgtacctgaccatcgaccgcgacgcggcggcgcgcctgggggtgcaggtctcg
gccatcaccgacgccctctacgacgccctcggtcagcggcagatctcgaccatctacacc
caggccaaccagtaccgggtggtgctggccagcgccgctgccgacagcctggggccggat
gccctcagccaggtctgggtaaaggcgggcagtggtacctcctccagcggcagcagtggc
accggcacggccaacacgaccgaaaccaccacggacaccagtcgcgccccggtacggctg
tccagcctggtgaagatggagcagcggccgacccgtctggtgatcaaccacctcagccag
ttcccggcggtgaccctgtccttcaacctggcgaacggcatttccctcggtgccgccgtg
gccgccatcgacgcggccaagcaggagatcggcctgccggtgggcatcaatacccactac
cagggcgcggcggcggccttccaggcctcgctgtccagcaccctgttgctgatcctggcg
gcggtggtggtgatgtacatcgtgctgggagtgctctacgagagcttcatccatccgttg
accatcctctcgacgctgccctcggcggccatcggcgccttgctggcgctcctgctcacc
ggcaacgacctcgggctgatcgcggtgatcggcatcatcctgctgatcggcatcgtcaag
aagaacgccatcatgatgatcgacttcgccctcgacgccgaacgccaccaggggctcacg
ccggaggaggccatctaccaggcggcgctgctgagattccggccgatccttatgaccacc
ctggccgcgctgttcggcgcggtgccgctgatgctggccaccggcgctggcgccgaattg
cgccagccgctgggcctggtgatggtgggtggcctgctggtgagccaggtgctgacgctg
ttcaccaccccggtgatctacctggccttcgaccgcctgggcgagcgcctgggtcggcgc
aggacggcctga
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integrated database retrieval system
