Pseudomonas benzopyrenica: V6W80_16330
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Entry
V6W80_16330 CDS
T10550
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pben Pseudomonas benzopyrenica
Brite
KEGG Orthology (KO) [BR:
pben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pben03032
]
V6W80_16330 (gyrA)
03400 DNA repair and recombination proteins [BR:
pben03400
]
V6W80_16330 (gyrA)
Enzymes [BR:
pben01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
V6W80_16330 (gyrA)
DNA replication proteins [BR:
pben03032
]
Prokaryotic type
DNA Topoisomerases
V6W80_16330 (gyrA)
DNA repair and recombination proteins [BR:
pben03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
V6W80_16330 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
WWM65275
LinkDB
All DBs
Position
complement(3448498..3451338)
Genome browser
AA seq
946 aa
AA seq
DB search
MGELAKEILPVNIEDELRQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSELGNDWN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDNAAAM
RYTEVRMSKLAHELLADLDKETVDWVPNYDGTEQIPAVMPTRIPNLLVNGSSGIAVGMAT
NIPPHNLGEVIDGCLALIENSELTVDDLMQYIPGPDFPTAGIINGRAGIIEAYRTGRGRI
YVRARAEVEDIDKSANRQQIVITELPYQLNKARLIEKIAELVKEKKIEGITELRDESDKD
GMRVVIELRRGETPEVVLNNLYAQTQLQTVFGINVVALLDGQPRTLNLKELLEAFIRHRR
EVVTRRTVYELRKARERGHILEGQAVALSNIDPVIELIKSSPTPAEAKERLIATPWESSA
VREMVERAGADSCRPDELPEQYGLHEGKYHLSPEQAQAILDLRLHRLTGLEHEKLIAEYQ
EILLQIGELIRILTNPERLMEVIREELEKVKAEFGDKRRTEIIASQVDLTIADLITEEDR
VVTISHGGYAKSQPLHAYQAQRRGGRGRSASAVKEEDYIEHLLVANSHTTLLLFSSLGKV
YWKRTYEIPEASRAARGRPLVNLLPLAEGERITAMLPVDLEAVRQQAPIGEEDLGEQDDN
LDIEDAVLVEDEVEVEVEGEEGELLDAEQDEPTGAYIFMATRNGTVKKTPLVQFSRPRSN
GLIALKLEEGDSLIAAAITDGAREVMLFSDGGKVIRFKERHVRTMGRTARGVRGMRLAEN
QRLISMLIPEPGAEILTASLNGFGKRTAMAEYPQRGRGGQGVIAMVINERNGPLIGAIQV
LDGEEIMLISDQGTLVRTPVEGISRTGRNTQGVTLIKLGKGEKLVGLERVQEPSVDEELL
DHEAELDDELLDKELPVDSHEPDQDDVLPGASDVPSDDLPNEDDER
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaactggccaaagaaatcctcccggtcaatatcgaagacgagttgcggcagtcg
tatctcgactacgcgatgagcgtcatcgttggccgggccttgccggatgtgcgtgacggc
ctcaagccggtgcaccggcgcgtgctctacgccatgagcgagctgggcaacgactggaac
aagccgtacaagaaatccgcccgtgtggtgggtgacgtcatcggtaagtaccacccccac
ggcgacaccgccgtctacgacaccatcgtgcggatggcccagcccttctcgctgcgctac
atgctggtggacggccagggcaacttcggttcggtggacggcgacaacgccgcggccatg
cgttacaccgaagtgcggatgtccaagctcgcccacgaactcttggccgacctggacaag
gaaaccgtcgactgggtgcccaactacgacggcaccgagcagatcccggcggtgatgccc
acgcgcatccccaacctgctggtcaacggttccagcggcatcgcggtcggcatggccacc
aacattccgccgcacaacctcggcgaagtgatcgatggctgcctggcgctgatcgaaaac
agcgagctgaccgtcgacgacctgatgcagtacatccccggtccggacttcccgaccgcg
ggcatcatcaacggtcgcgccggcatcatcgaggcctatcgtaccggtcgtggccgcatc
tacgtacgggcccgcgccgaagtcgaggacatcgacaagagcgccaatcgccagcagatc
gtcatcaccgagctgccctaccagctcaacaaggcacggctgatcgagaagatcgccgag
ctggtgaaagagaagaagatcgaaggcatcaccgagctgcgcgacgagtccgacaaggat
ggcatgcgcgtggtcattgagctgcgccgtggcgaaacccccgaggtcgtgctcaacaac
ctctacgcccagacccagctgcagacggtgttcggcatcaacgtggtggccctgctcgac
ggccagccgcgcaccctgaacctcaaggaactgctggaagccttcattcgccaccgtcgc
gaagtcgtcacccgacggaccgtctacgaactgcgcaaggcgcgcgagcgtggccacatc
ctcgaaggccaggcggtcgccctgtccaacatcgatccggtcatcgagctgatcaagagc
tcgccgaccccggccgaagccaaggaacgcctgatcgccacgccttgggaatccagcgcg
gtacgcgagatggtcgagcgcgccggcgccgattcctgccgtccggacgaactgcccgag
cagtatggtctgcacgagggcaaataccacctctcgccggaacaggcccaggccattctg
gatctgcgtctgcaccgcctgaccggtctggagcacgagaagctcatcgccgagtaccag
gagatcctgctgcagatcggcgagctgatccgcatcctgaccaaccccgagcggctgatg
gaagtcatccgcgaggagctggaaaaggtcaaggccgagttcggcgacaagcgtcgcacc
gagatcatcgcctcccaggtggacctgaccatcgccgacctcatcaccgaggaagaccgc
gtcgtcaccatctcccacggcggctatgccaagtcccagccgctgcacgcctaccaggcc
cagcgccggggcggtcgcggtcgctcggcctcggcggtcaaggaagaggactacatcgaa
cacctgctggtcgccaacagccataccaccctgttgctgttctccagcctgggcaaggtc
tactggaagcgtacctacgagatccccgaggcctcccgcgccgcccgtggccggccgctg
gtcaacctgctgccgctggccgaaggcgagcgcatcactgccatgctgccggtcgatctg
gaagccgtgcgccagcaggcgcccatcggtgaagaggacctgggcgagcaggacgacaac
ctggacatcgaagacgccgtgctggtggaagacgaggtcgaggtcgaggtcgaaggcgaa
gagggcgagctcctcgacgccgagcaggacgagcccaccggtgcctacatcttcatggcc
acccgcaacggcaccgtgaagaagaccccgctggtgcagttcagccgtccgcgcagcaac
ggcctgatcgcgctgaagctagaggagggcgacagcctgatcgctgccgccatcaccgac
ggtgcccgcgaagtcatgctgttctccgacggtggcaaggtcatccgcttcaaggagcgc
catgtgcgcaccatgggccgtaccgcccgcggcgtgcgcggcatgcgtctggccgagaac
cagcggttgatttccatgctgatccccgaaccgggcgccgagatcctgaccgccagcctc
aatggcttcggcaagcgcaccgccatggccgaatacccgcagcgtggtcgcggtggccag
ggcgtgatcgccatggtcatcaacgaacgcaacggtcccctgatcggtgccatccaggta
ctggacggcgaagagatcatgctgatctccgaccagggcaccctggtgcgtaccccggtc
gagggcatctcccgtaccggccgtaacacccagggcgtgaccctgatcaagctcggcaag
ggcgagaaactggtgggcctggagcgggtgcaggagccttcggtggacgaagagctgctg
gaccacgaagccgagctagacgacgaactgctcgacaaggaattgccggtcgacagccac
gagccggaccaggacgatgtgctgcccggtgccagcgacgtgccgagcgatgacctgccc
aacgaggatgacgagcgatga
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